Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU4-39P-201ENST00000362455 127 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 RNA5SP447-201ENST00000363749 119 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 AC083799.1-201ENST00000366451 910 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 CCNB2P1-201ENST00000399411 1150 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AC004987.3-201ENST00000413879 771 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.66□□□□□ -1.82
CX3CR1P49238 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CR1P49238 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.66□□□□□ -1.82
CX3CR1P49238 MTND2P25-201ENST00000449028 610 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 RPS20P4-201ENST00000461659 355 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 AC018635.1-201ENST00000468292 1030 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 AC013356.1-201ENST00000489027 564 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 RPL35P6-201ENST00000490024 372 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 AC025554.1-201ENST00000505641 188 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 RN7SKP82-201ENST00000516786 223 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AP000919.1-202ENST00000581139 1264 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.66□□□□□ -1.82
CX3CR1P49238 FAM27D1-201ENST00000612308 341 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.66□□□□□ -1.82
CX3CR1P49238 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CR1P49238 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.66□□□□□ -1.82
CX3CR1P49238 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CR1P49238 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CR1P49238 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CR1P49238 DCAF13P3-201ENST00000561147 1334 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 AC012618.3-205ENST00000637896 1496 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CR1P49238 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CR1P49238 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CR1P49238 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
CX3CR1P49238 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.65□□□□□ -1.82
CX3CR1P49238 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CX3CR1P49238 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CX3CR1P49238 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.65□□□□□ -1.83
CX3CR1P49238 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CR1P49238 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CR1P49238 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CR1P49238 MIR124-3-201ENST00000384866 87 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CR1P49238 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.65□□□□□ -1.83
CX3CR1P49238 RPS29P17-201ENST00000430795 166 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 LYPLA1P1-201ENST00000434514 622 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CR1P49238 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AL161747.1-201ENST00000480068 358 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AC104687.1-201ENST00000485829 412 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 AF213884.1-201ENST00000488102 463 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 AC007686.1-201ENST00000488511 463 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CR1P49238 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AC110792.2-201ENST00000510278 224 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 KCTD9P2-201ENST00000512203 1013 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.65□□□□□ -1.83
CX3CR1P49238 RNA5SP49-201ENST00000516450 115 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 TRAV8-5-201ENST00000537369 341 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.65□□□□□ -1.83
CX3CR1P49238 TVP23BP1-201ENST00000557500 617 ntBASIC3.65□□□□□ -1.83
CX3CR1P49238 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.65□□□□□ -1.83
CX3CR1P49238 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CR1P49238 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.65□□□□□ -1.83
CX3CR1P49238 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CX3CR1P49238 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CX3CR1P49238 ZNF962P-201ENST00000443465 3140 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CX3CR1P49238 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CR1P49238 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CX3CR1P49238 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CX3CR1P49238 RNA5SP391-201ENST00000363456 119 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 RNA5SP239-201ENST00000410218 129 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AC114814.2-201ENST00000419195 485 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 ACTR3P2-201ENST00000439585 1257 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AL353093.1-201ENST00000441292 436 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 TPTE2P3-201ENST00000441562 1189 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.64□□□□□ -1.83
CX3CR1P49238 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CR1P49238 snoU13.1-201ENST00000459157 104 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 RN7SL205P-201ENST00000490174 284 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 RN7SL691P-201ENST00000494487 301 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CR1P49238 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CR1P49238 AC105233.3-201ENST00000531125 744 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms