Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL12P48061 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL12P48061 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL12P48061 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.91□□□□□ -1.78
CXCL12P48061 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CXCL12P48061 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 OR52B1P-201ENST00000316506 909 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 RNU1-15P-201ENST00000353977 144 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CXCL12P48061 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 RPS7P15-201ENST00000415804 584 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 RPS23P10-201ENST00000416185 486 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 AC245052.5-201ENST00000416320 649 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 AC073136.2-201ENST00000417282 849 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.91□□□□□ -1.78
CXCL12P48061 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.91□□□□□ -1.78
CXCL12P48061 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL12P48061 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL12P48061 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL12P48061 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL12P48061 RPL32P34-201ENST00000486380 400 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL12P48061 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 GMPSP1-201ENST00000514075 579 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL12P48061 AC016550.3-201ENST00000515706 767 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 RNA5SP164-201ENST00000516533 110 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL12P48061 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.91□□□□□ -1.78
CXCL12P48061 AC107918.3-201ENST00000533272 382 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 AL031985.2-201ENST00000600955 480 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL12P48061 AL596275.2-204ENST00000641628 552 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 AL596275.2-206ENST00000641957 626 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 AC092435.4-201ENST00000623012 4159 ntBASIC3.91□□□□□ -1.78
CXCL12P48061 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
CXCL12P48061 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL12P48061 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CXCL12P48061 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CXCL12P48061 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL12P48061 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CXCL12P48061 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.9□□□□□ -1.78
CXCL12P48061 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.9□□□□□ -1.78
CXCL12P48061 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
CXCL12P48061 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.9□□□□□ -1.78
CXCL12P48061 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.9□□□□□ -1.78
CXCL12P48061 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CXCL12P48061 PRO1804-201ENST00000623780 2050 ntBASIC3.9□□□□□ -1.78
CXCL12P48061 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.9□□□□□ -1.78
CXCL12P48061 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.9□□□□□ -1.79
CXCL12P48061 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL12P48061 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CXCL12P48061 AL359643.1-201ENST00000404109 423 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.9□□□□□ -1.79
CXCL12P48061 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL12P48061 RPL7P4-203ENST00000430239 730 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.9□□□□□ -1.79
CXCL12P48061 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.9□□□□□ -1.79
CXCL12P48061 AL445433.1-201ENST00000457507 257 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 SNORA59A-201ENST00000459326 152 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL12P48061 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.9□□□□□ -1.79
CXCL12P48061 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.9□□□□□ -1.79
CXCL12P48061 RFPL4AP3-201ENST00000515267 345 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL12P48061 AC007991.1-201ENST00000522680 631 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.9□□□□□ -1.79
CXCL12P48061 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.9□□□□□ -1.79
CXCL12P48061 OR5B10P-201ENST00000532869 642 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.9□□□□□ -1.79
CXCL12P48061 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.9□□□□□ -1.79
CXCL12P48061 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.9□□□□□ -1.79
CXCL12P48061 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 AC140113.4-201ENST00000622087 222 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 AC005086.4-201ENST00000623065 213 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 AC138907.10-201ENST00000623708 983 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL12P48061 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL12P48061 AC005332.5-201ENST00000591222 2919 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL12P48061 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.9□□□□□ -1.79
CXCL12P48061 NOL8P1-201ENST00000508336 3529 ntBASIC3.9□□□□□ -1.79
CXCL12P48061 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CXCL12P48061 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL12P48061 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL12P48061 AL450326.2-201ENST00000421913 1962 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.89□□□□□ -1.79
CXCL12P48061 RNU6-1331P-201ENST00000363658 106 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CXCL12P48061 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms