Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXD13P35453 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD13P35453 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXD13P35453 AC013468.1-201ENST00000608680 598 ntBASIC4.83□□□□□ -1.64
HOXD13P35453 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.83□□□□□ -1.64
HOXD13P35453 AL109659.3-201ENST00000624985 950 ntBASIC4.83□□□□□ -1.64
HOXD13P35453 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXD13P35453 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD13P35453 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD13P35453 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD13P35453 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HOXD13P35453 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD13P35453 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXD13P35453 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXD13P35453 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD13P35453 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD13P35453 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD13P35453 MTND4P9-201ENST00000507819 1346 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD13P35453 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXD13P35453 MIR331-201ENST00000362302 94 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 RNA5SP22-201ENST00000365393 109 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXD13P35453 U3.22-201ENST00000391120 215 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 RPL7P27-201ENST00000403775 720 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 PRRC2CP1-201ENST00000404428 159 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 ELOCP19-201ENST00000411919 318 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD13P35453 ARL4AP3-201ENST00000441452 574 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD13P35453 RPS26P30-201ENST00000443431 335 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXD13P35453 RPL7P31-201ENST00000450192 724 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD13P35453 AC005008.1-201ENST00000456151 612 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC091959.2-201ENST00000477363 321 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD13P35453 HMGB1P21-201ENST00000502313 581 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 ATP1B1P1-201ENST00000509767 915 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD13P35453 AC005351.1-201ENST00000511152 786 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 RNA5SP497-201ENST00000516081 97 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD13P35453 AC134698.5-201ENST00000519444 336 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 IGLV3-26-201ENST00000520756 302 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD13P35453 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 IGJP1-201ENST00000522682 475 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD13P35453 TRAV8-5-201ENST00000537369 341 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 AC023825.1-201ENST00000566704 1030 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC090666.1-201ENST00000578241 445 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 RN7SL176P-201ENST00000580352 264 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD13P35453 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD13P35453 AL354984.3-201ENST00000604803 325 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HOXD13P35453 MIR6864-201ENST00000617935 70 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AP005019.3-201ENST00000620418 560 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC073342.3-201ENST00000624211 193 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 AC126544.2-201ENST00000625174 749 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HOXD13P35453 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD13P35453 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD13P35453 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXD13P35453 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 AC053481.2-202ENST00000582394 1500 ntBASIC4.82□□□□□ -1.64
HOXD13P35453 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD13P35453 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD13P35453 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HOXD13P35453 AC139713.2-214ENST00000642059 1811 ntBASIC4.81□□□□□ -1.64
HOXD13P35453 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD13P35453 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD13P35453 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD13P35453 AC025263.3-201ENST00000622965 1396 ntBASIC4.81□□□□□ -1.64
HOXD13P35453 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HOXD13P35453 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HOXD13P35453 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD13P35453 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD13P35453 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD13P35453 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD13P35453 IL6STP1-201ENST00000346911 1020 ntBASIC4.81□□□□□ -1.64
HOXD13P35453 RNA5SP391-201ENST00000363456 119 ntBASIC4.81□□□□□ -1.64
HOXD13P35453 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HOXD13P35453 SNORA11B-201ENST00000408175 129 ntBASIC4.81□□□□□ -1.64
HOXD13P35453 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXD13P35453 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD13P35453 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD13P35453 SKP1P3-201ENST00000429280 487 ntBASIC4.81□□□□□ -1.64
HOXD13P35453 RPL23AP25-201ENST00000430973 463 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms