Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CIITAP33076 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.08□□□□□ -1.6
CIITAP33076 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CIITAP33076 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CIITAP33076 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CIITAP33076 RNA5SP447-201ENST00000363749 119 ntBASIC5.08□□□□□ -1.6
CIITAP33076 U6.112-201ENST00000384129 70 ntBASIC5.08□□□□□ -1.6
CIITAP33076 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CIITAP33076 RNU6-1242P-201ENST00000391052 103 ntBASIC5.08□□□□□ -1.6
CIITAP33076 AC093719.1-202ENST00000392735 373 ntBASIC5.08□□□□□ -1.6
CIITAP33076 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CIITAP33076 AL359643.1-201ENST00000404109 423 ntBASIC5.08□□□□□ -1.6
CIITAP33076 MIR1271-201ENST00000408537 86 ntBASIC5.08□□□□□ -1.6
CIITAP33076 GSTM3P2-201ENST00000412746 530 ntBASIC5.08□□□□□ -1.6
CIITAP33076 LIPT1P1-201ENST00000415870 1186 ntBASIC5.08□□□□□ -1.6
CIITAP33076 TMSB10P2-201ENST00000416049 131 ntBASIC5.08□□□□□ -1.6
CIITAP33076 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CIITAP33076 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.08□□□□□ -1.6
CIITAP33076 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.08□□□□□ -1.6
CIITAP33076 GTF2IP3-201ENST00000433887 494 ntBASIC5.08□□□□□ -1.6
CIITAP33076 AL353597.2-202ENST00000434901 373 ntBASIC5.08□□□□□ -1.6
CIITAP33076 FTH1P16-201ENST00000435241 552 ntBASIC5.08□□□□□ -1.6
CIITAP33076 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CIITAP33076 AC092685.1-201ENST00000447960 1243 ntBASIC5.08□□□□□ -1.6
CIITAP33076 MTND2P28-201ENST00000457540 1044 ntBASIC5.08□□□□□ -1.6
CIITAP33076 RPL6P9-201ENST00000466502 859 ntBASIC5.08□□□□□ -1.6
CIITAP33076 RPL23AP12-201ENST00000467573 473 ntBASIC5.08□□□□□ -1.6
CIITAP33076 NDUFA5P9-201ENST00000472609 340 ntBASIC5.08□□□□□ -1.6
CIITAP33076 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.08□□□□□ -1.6
CIITAP33076 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.08□□□□□ -1.6
CIITAP33076 RN7SKP46-201ENST00000515942 234 ntBASIC5.08□□□□□ -1.6
CIITAP33076 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.08□□□□□ -1.6
CIITAP33076 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 AC087897.1-201ENST00000550134 156 ntBASIC5.08□□□□□ -1.6
CIITAP33076 MRPS36P5-201ENST00000551909 298 ntBASIC5.08□□□□□ -1.6
CIITAP33076 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.08□□□□□ -1.6
CIITAP33076 AL109741.3-201ENST00000561748 592 ntBASIC5.08□□□□□ -1.6
CIITAP33076 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 Z82195.1-201ENST00000604558 398 ntBASIC5.08□□□□□ -1.6
CIITAP33076 AC009948.4-201ENST00000604692 675 ntBASIC5.08□□□□□ -1.6
CIITAP33076 AC107952.2-201ENST00000606048 486 ntBASIC5.08□□□□□ -1.6
CIITAP33076 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 PART1_2.1-201ENST00000612397 250 ntBASIC5.08□□□□□ -1.6
CIITAP33076 uc_338.9-201ENST00000617424 182 ntBASIC5.08□□□□□ -1.6
CIITAP33076 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.08□□□□□ -1.6
CIITAP33076 AC006065.6-201ENST00000625201 545 ntBASIC5.08□□□□□ -1.6
CIITAP33076 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.08□□□□□ -1.6
CIITAP33076 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CIITAP33076 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CIITAP33076 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CIITAP33076 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
CIITAP33076 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 AC021242.1-201ENST00000507315 2035 ntBASIC5.07□□□□□ -1.6
CIITAP33076 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CIITAP33076 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CIITAP33076 AC139769.1-204ENST00000472297 1931 ntBASIC5.07□□□□□ -1.6
CIITAP33076 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CIITAP33076 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CIITAP33076 RNU6-452P-201ENST00000384406 107 ntBASIC5.07□□□□□ -1.6
CIITAP33076 RNU6-244P-201ENST00000391028 104 ntBASIC5.07□□□□□ -1.6
CIITAP33076 U3.22-201ENST00000391120 215 ntBASIC5.07□□□□□ -1.6
CIITAP33076 MCTS2P-201ENST00000394552 546 ntBASIC5.07□□□□□ -1.6
CIITAP33076 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.07□□□□□ -1.6
CIITAP33076 AL139095.3-201ENST00000419672 1203 ntBASIC5.07□□□□□ -1.6
CIITAP33076 AC062016.2-201ENST00000420950 676 ntBASIC5.07□□□□□ -1.6
CIITAP33076 RPS12P10-201ENST00000427031 377 ntBASIC5.07□□□□□ -1.6
CIITAP33076 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 RPS24P8-201ENST00000431490 402 ntBASIC5.07□□□□□ -1.6
CIITAP33076 AL035458.1-201ENST00000433096 585 ntBASIC5.07□□□□□ -1.6
CIITAP33076 MTCO1P52-201ENST00000433928 531 ntBASIC5.07□□□□□ -1.6
CIITAP33076 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.07□□□□□ -1.6
CIITAP33076 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CIITAP33076 ZNF886P-201ENST00000450781 723 ntBASIC5.07□□□□□ -1.6
CIITAP33076 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.07□□□□□ -1.6
CIITAP33076 DHFRP3-201ENST00000455595 559 ntBASIC5.07□□□□□ -1.6
CIITAP33076 AP000942.1-201ENST00000463969 747 ntBASIC5.07□□□□□ -1.6
CIITAP33076 RPL21P126-201ENST00000470049 478 ntBASIC5.07□□□□□ -1.6
CIITAP33076 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 RPS4XP6-201ENST00000477670 797 ntBASIC5.07□□□□□ -1.6
CIITAP33076 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.07□□□□□ -1.6
CIITAP33076 NIP7P2-201ENST00000485801 544 ntBASIC5.07□□□□□ -1.6
CIITAP33076 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.07□□□□□ -1.6
CIITAP33076 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.07□□□□□ -1.6
CIITAP33076 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CIITAP33076 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CIITAP33076 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 CCDC58P3-201ENST00000590792 430 ntBASIC5.07□□□□□ -1.6
CIITAP33076 BNIP3P24-201ENST00000593398 557 ntBASIC5.07□□□□□ -1.6
CIITAP33076 RPL26P30-202ENST00000602923 645 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms