Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 OR11H5P-202ENST00000641612 1325 ntBASIC4.21□□□□□ -1.73
HOXA9P31269 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
HOXA9P31269 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.73
HOXA9P31269 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA9P31269 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA9P31269 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HOXA9P31269 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA9P31269 OR4A15-201ENST00000314706 1035 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 RNA5SP124-201ENST00000362739 110 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 RN7SKP156-201ENST00000410308 342 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 RAB9AP3-201ENST00000412737 573 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXA9P31269 PRELID3BP10-201ENST00000431957 584 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA9P31269 RAB9AP1-201ENST00000449393 573 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 OR7L1P-201ENST00000456181 380 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA9P31269 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXA9P31269 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.21□□□□□ -1.74
HOXA9P31269 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA9P31269 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXA9P31269 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA9P31269 AC024220.1-201ENST00000603675 484 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 AL121772.2-201ENST00000614331 297 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 AC009237.17-201ENST00000618111 748 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 FP236240.3-201ENST00000623061 327 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXA9P31269 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.21□□□□□ -1.74
HOXA9P31269 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA9P31269 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA9P31269 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA9P31269 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA9P31269 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA9P31269 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA9P31269 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA9P31269 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXA9P31269 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA9P31269 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXA9P31269 RNU1-15P-201ENST00000353977 144 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA9P31269 MIR23A-201ENST00000385245 73 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 RPS23P10-201ENST00000416185 486 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXA9P31269 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA9P31269 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXA9P31269 RPS6P12-201ENST00000432491 726 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXA9P31269 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXA9P31269 NANOGP10-201ENST00000453325 895 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 AL121877.1-201ENST00000453704 622 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 AC010469.1-201ENST00000463864 576 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 ACTR3P3-201ENST00000480448 893 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 RPS3AP6-201ENST00000484430 795 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 RN7SL323P-201ENST00000494712 295 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 SNORD116-30-201ENST00000516468 85 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 NDUFA5P2-201ENST00000519723 344 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.2□□□□□ -1.74
HOXA9P31269 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXA9P31269 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXA9P31269 AC084757.1-201ENST00000559987 490 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXA9P31269 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXA9P31269 RPL23AP87-202ENST00000573039 466 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXA9P31269 AC012417.1-201ENST00000582307 1039 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXA9P31269 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.2□□□□□ -1.74
HOXA9P31269 AL356121.2-201ENST00000624715 780 ntBASIC4.2□□□□□ -1.74
HOXA9P31269 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA9P31269 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
HOXA9P31269 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA9P31269 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA9P31269 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA9P31269 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA9P31269 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXA9P31269 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
HOXA9P31269 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXA9P31269 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
HOXA9P31269 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA9P31269 SNORA70.4-201ENST00000365509 134 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 MIR30B-201ENST00000384850 88 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXA9P31269 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA9P31269 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA9P31269 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA9P31269 NPM1P34-201ENST00000428821 893 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 GOT2P5-201ENST00000433995 546 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 HLA-N-201ENST00000437516 135 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA9P31269 AL157884.3-201ENST00000448273 1184 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 FABP3P2-201ENST00000453169 399 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXA9P31269 VWA8P1-201ENST00000510889 176 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 RN7SKP157-201ENST00000516174 282 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 AC026403.1-201ENST00000518938 295 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 MTND1P6-201ENST00000523621 946 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 SMARCE1P4-201ENST00000523647 241 ntBASIC4.19□□□□□ -1.74
HOXA9P31269 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms