Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.59□□□□□ -1.67
ABCD3P28288 AC027309.2-201ENST00000520566 192 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 OR5AZ1P-201ENST00000527448 943 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 AP000676.2-201ENST00000529711 301 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ABCD3P28288 AL122126.1-201ENST00000546905 1318 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.59□□□□□ -1.67
ABCD3P28288 GTF2IP8-201ENST00000560687 584 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 MIR4646-201ENST00000580775 63 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.59□□□□□ -1.67
ABCD3P28288 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.59□□□□□ -1.67
ABCD3P28288 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.59□□□□□ -1.67
ABCD3P28288 MTND3P19-201ENST00000603825 345 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ABCD3P28288 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ABCD3P28288 AC068722.2-201ENST00000618734 544 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.59□□□□□ -1.67
ABCD3P28288 AP006248.2-201ENST00000623309 592 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 AC112694.2-201ENST00000623697 768 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 MAPK10-349ENST00000641767 3661 ntBASIC4.59□□□□□ -1.67
ABCD3P28288 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
ABCD3P28288 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
ABCD3P28288 INTS6P1-201ENST00000504674 2530 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.58□□□□□ -1.68
ABCD3P28288 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCD3P28288 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ABCD3P28288 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ABCD3P28288 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
ABCD3P28288 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
ABCD3P28288 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.58□□□□□ -1.68
ABCD3P28288 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ABCD3P28288 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ABCD3P28288 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ABCD3P28288 AC017079.1-201ENST00000333650 415 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 RNU6-560P-201ENST00000364007 108 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ABCD3P28288 GLULP6-201ENST00000399502 913 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AL109941.1-201ENST00000401925 229 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 BTBD10P2-201ENST00000404779 676 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCD3P28288 AL136133.1-201ENST00000413694 376 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC004987.3-201ENST00000413879 771 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.58□□□□□ -1.68
ABCD3P28288 CHEK2P3-201ENST00000416118 248 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC092634.6-201ENST00000418558 192 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC013429.2-201ENST00000418798 781 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCD3P28288 AC012519.1-201ENST00000424588 610 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 RPL7P44-201ENST00000424827 742 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 OR4F13P-201ENST00000428478 931 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCD3P28288 AC005345.1-201ENST00000431868 217 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 LYPLA1P1-201ENST00000434514 622 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.58□□□□□ -1.68
ABCD3P28288 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCD3P28288 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.58□□□□□ -1.68
ABCD3P28288 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.58□□□□□ -1.68
ABCD3P28288 RFC5P1-201ENST00000454419 874 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.58□□□□□ -1.68
ABCD3P28288 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.58□□□□□ -1.68
ABCD3P28288 RPS17P2-201ENST00000461663 408 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC093270.2-201ENST00000486157 792 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 NDUFA5P12-201ENST00000503796 343 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 MRPS33P2-201ENST00000507850 322 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.58□□□□□ -1.68
ABCD3P28288 AC092593.2-201ENST00000513866 913 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCD3P28288 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.58□□□□□ -1.68
ABCD3P28288 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCD3P28288 CYCSP28-201ENST00000534284 321 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AP000619.3-201ENST00000535634 1127 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.58□□□□□ -1.68
ABCD3P28288 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ABCD3P28288 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCD3P28288 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.58□□□□□ -1.68
ABCD3P28288 TVP23CP2-201ENST00000571473 623 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC022662.1-201ENST00000580252 331 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCD3P28288 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.58□□□□□ -1.68
ABCD3P28288 AC011487.3-201ENST00000593607 453 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 BNIP3P26-201ENST00000600827 554 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.58□□□□□ -1.68
ABCD3P28288 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.58□□□□□ -1.68
ABCD3P28288 AC133644.2-201ENST00000608142 540 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AL049794.2-201ENST00000616301 365 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.58□□□□□ -1.68
ABCD3P28288 AC006386.1-201ENST00000619436 415 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC013470.4-201ENST00000619978 986 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AC098679.5-201ENST00000624394 571 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AL353662.3-201ENST00000625131 237 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.58□□□□□ -1.68
ABCD3P28288 AL596275.2-204ENST00000641628 552 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 AL596275.2-206ENST00000641957 626 ntBASIC4.58□□□□□ -1.68
ABCD3P28288 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
ABCD3P28288 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.58□□□□□ -1.68
ABCD3P28288 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
ABCD3P28288 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
ABCD3P28288 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.58□□□□□ -1.68
ABCD3P28288 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms