Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
POLR2AP24928 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
POLR2AP24928 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.33□□□□□ -1.56
POLR2AP24928 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
POLR2AP24928 RNU6-867P-201ENST00000364956 107 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 RPL7P27-201ENST00000403775 720 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 DPPA2P1-201ENST00000428060 556 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 BTF3P10-201ENST00000433415 495 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.33□□□□□ -1.56
POLR2AP24928 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 AC104978.1-201ENST00000449387 391 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.33□□□□□ -1.56
POLR2AP24928 VN1R32P-201ENST00000452234 905 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 RPL12P26-201ENST00000452430 487 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.33□□□□□ -1.56
POLR2AP24928 RPS3AP22-201ENST00000488297 769 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 RPL35P6-201ENST00000490024 372 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AC021146.8-201ENST00000507455 733 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 ELOCP32-201ENST00000548625 324 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.33□□□□□ -1.56
POLR2AP24928 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.33□□□□□ -1.56
POLR2AP24928 AC006362.1-201ENST00000567392 174 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 MIR3915-201ENST00000578518 97 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 CBX3P2-202ENST00000583365 535 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.33□□□□□ -1.56
POLR2AP24928 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.33□□□□□ -1.56
POLR2AP24928 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
POLR2AP24928 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 TTC41P-205ENST00000551270 3963 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 EIF2AP4-201ENST00000424793 1781 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 RNU6-1215P-201ENST00000384441 102 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 MIR554-201ENST00000384874 96 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 RNU6-932P-201ENST00000391108 106 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AL158825.1-201ENST00000414735 521 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 ELOCP17-201ENST00000414751 326 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AC093578.1-201ENST00000415219 368 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AC013429.2-201ENST00000418798 781 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AC092162.1-201ENST00000432828 434 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.33□□□□□ -1.56
POLR2AP24928 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.33□□□□□ -1.56
POLR2AP24928 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
POLR2AP24928 BUD31P2-201ENST00000449374 300 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.33□□□□□ -1.56
POLR2AP24928 AC016687.1-201ENST00000482574 353 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 FABP5P12-201ENST00000515543 389 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 RNA5SP73-201ENST00000516744 108 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.33□□□□□ -1.56
POLR2AP24928 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.33□□□□□ -1.56
POLR2AP24928 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.33□□□□□ -1.56
POLR2AP24928 MTND4LP18-201ENST00000526864 291 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.33□□□□□ -1.56
POLR2AP24928 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.33□□□□□ -1.56
POLR2AP24928 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.33□□□□□ -1.56
POLR2AP24928 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 SNX6P1-201ENST00000601728 1224 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 AC079610.2-201ENST00000604818 690 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 AC005609.4-201ENST00000625071 447 ntBASIC5.33□□□□□ -1.56
POLR2AP24928 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.33□□□□□ -1.56
POLR2AP24928 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
POLR2AP24928 ZNF542P-204ENST00000482727 1305 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 AC095050.2-201ENST00000510748 1458 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
POLR2AP24928 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
POLR2AP24928 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
POLR2AP24928 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
POLR2AP24928 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
POLR2AP24928 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
POLR2AP24928 AL445213.1-201ENST00000412589 747 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 MTCO3P41-201ENST00000414801 328 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 OR4K6P-201ENST00000416478 897 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.32□□□□□ -1.56
POLR2AP24928 RAC1P8-201ENST00000427086 527 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 Z74696.2-201ENST00000436514 498 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 YWHAZP7-201ENST00000436906 631 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
POLR2AP24928 RPL34P26-201ENST00000445636 354 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms