Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC022695.1-201ENST00000522089 237 ntBASIC3.69□□□□□ -1.82
COL5A1P20908 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.69□□□□□ -1.82
COL5A1P20908 AL133247.2-201ENST00000603236 482 ntBASIC3.69□□□□□ -1.82
COL5A1P20908 AL137849.1-201ENST00000604767 169 ntBASIC3.69□□□□□ -1.82
COL5A1P20908 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A1P20908 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.69□□□□□ -1.82
COL5A1P20908 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.69□□□□□ -1.82
COL5A1P20908 AL773545.4-201ENST00000637262 310 ntBASIC3.69□□□□□ -1.82
COL5A1P20908 AL513478.4-201ENST00000641636 310 ntBASIC3.69□□□□□ -1.82
COL5A1P20908 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL5A1P20908 AC004944.1-201ENST00000517807 3059 ntBASIC3.69□□□□□ -1.82
COL5A1P20908 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL5A1P20908 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL5A1P20908 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL5A1P20908 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL5A1P20908 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A1P20908 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.68□□□□□ -1.82
COL5A1P20908 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A1P20908 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.68□□□□□ -1.82
COL5A1P20908 AL391219.1-201ENST00000422570 483 ntBASIC3.68□□□□□ -1.82
COL5A1P20908 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.68□□□□□ -1.82
COL5A1P20908 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.68□□□□□ -1.82
COL5A1P20908 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.68□□□□□ -1.82
COL5A1P20908 SNORA70.17-201ENST00000516449 133 ntBASIC3.68□□□□□ -1.82
COL5A1P20908 HMGB1P19-201ENST00000517578 577 ntBASIC3.68□□□□□ -1.82
COL5A1P20908 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.68□□□□□ -1.82
COL5A1P20908 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.68□□□□□ -1.82
COL5A1P20908 GNRHR2P1-201ENST00000555315 631 ntBASIC3.68□□□□□ -1.82
COL5A1P20908 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.68□□□□□ -1.82
COL5A1P20908 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.68□□□□□ -1.82
COL5A1P20908 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.68□□□□□ -1.82
COL5A1P20908 AL139089.1-201ENST00000620372 975 ntBASIC3.68□□□□□ -1.82
COL5A1P20908 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.68□□□□□ -1.82
COL5A1P20908 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.68□□□□□ -1.82
COL5A1P20908 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A1P20908 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A1P20908 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A1P20908 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A1P20908 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COL5A1P20908 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A1P20908 RNA5SP432-201ENST00000362480 116 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 AC096644.3-201ENST00000416788 338 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 OR6C64P-201ENST00000419708 825 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A1P20908 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.67□□□□□ -1.82
COL5A1P20908 AC010469.1-201ENST00000463864 576 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.67□□□□□ -1.82
COL5A1P20908 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 OR5B10P-201ENST00000532869 642 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.67□□□□□ -1.82
COL5A1P20908 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 AP005205.1-201ENST00000563503 508 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A1P20908 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A1P20908 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.67□□□□□ -1.82
COL5A1P20908 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A1P20908 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.67□□□□□ -1.82
COL5A1P20908 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A1P20908 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A1P20908 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.67□□□□□ -1.82
COL5A1P20908 RPL7AP73-201ENST00000413490 353 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.67□□□□□ -1.82
COL5A1P20908 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC3.67□□□□□ -1.82
COL5A1P20908 AL158156.1-201ENST00000422509 473 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 AC006994.1-201ENST00000438212 839 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.67□□□□□ -1.82
COL5A1P20908 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.67□□□□□ -1.82
COL5A1P20908 UBDP1-202ENST00000457888 382 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 RPL23AP12-201ENST00000467573 473 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 RN7SL601P-201ENST00000471221 293 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 IGHV3-63-201ENST00000518422 341 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.67□□□□□ -1.82
COL5A1P20908 AC074276.2-201ENST00000619891 348 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 CR392039.4-201ENST00000624968 501 ntBASIC3.67□□□□□ -1.82
COL5A1P20908 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A1P20908 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.67□□□□□ -1.82
COL5A1P20908 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A1P20908 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A1P20908 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL5A1P20908 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
COL5A1P20908 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.66□□□□□ -1.82
COL5A1P20908 AC092435.4-201ENST00000623012 4159 ntBASIC3.66□□□□□ -1.82
COL5A1P20908 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
COL5A1P20908 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL5A1P20908 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COL5A1P20908 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.66□□□□□ -1.82
COL5A1P20908 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL5A1P20908 MIR513A2-201ENST00000385249 127 ntBASIC3.66□□□□□ -1.82
COL5A1P20908 TPTE2P3-201ENST00000441562 1189 ntBASIC3.66□□□□□ -1.82
COL5A1P20908 AL591503.2-201ENST00000442314 1005 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms