Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 XPOTP1-201ENST00000443317 2398 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 OR5P1P-201ENST00000299512 925 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 RNU1-130P-201ENST00000363930 160 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 DNAJC19P6-201ENST00000401853 280 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 PRRC2CP1-201ENST00000404428 159 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 RNA5SP239-201ENST00000410218 129 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AL158825.1-201ENST00000414735 521 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 SNRPFP1-201ENST00000414761 252 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 TMSB10P2-201ENST00000416049 131 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 NUP35P2-201ENST00000416748 943 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC073310.1-201ENST00000423226 1033 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC093422.3-201ENST00000428506 305 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 RPL7P33-201ENST00000444159 742 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC005255.1-201ENST00000593748 216 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AL671309.1-201ENST00000603750 544 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AL359535.1-201ENST00000612100 1087 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC107308.1-201ENST00000615897 301 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 FRG1HP-204ENST00000617940 757 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AL163051.2-201ENST00000618976 735 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC017104.5-201ENST00000637647 639 ntBASIC4.43□□□□□ -1.7
HLA-DPA1P20036 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPA1P20036 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC008033.1-201ENST00000216407 1162 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AL512646.1-201ENST00000269395 1077 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 RNU1-32P-201ENST00000363937 159 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 RNU2-21P-201ENST00000410368 188 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 VN1R42P-201ENST00000424651 344 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 OR5AW1P-201ENST00000426334 1006 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC011998.1-201ENST00000433403 117 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 MTND4P15-201ENST00000437913 1033 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 UBE2V1P5-201ENST00000440070 405 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 RN7SL481P-201ENST00000477764 299 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC126121.1-201ENST00000482313 553 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 ATP1B1P1-201ENST00000509767 915 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC008694.2-201ENST00000517591 306 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC074029.1-201ENST00000552531 1044 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 RMST_10.1-201ENST00000616309 154 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC073569.3-201ENST00000619055 682 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 PNPT1P2-201ENST00000456768 2050 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 NMD3P1-201ENST00000439704 1488 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 AC105074.1-201ENST00000623380 3095 ntBASIC4.42□□□□□ -1.7
HLA-DPA1P20036 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPA1P20036 ASNSP1-204ENST00000641977 1664 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms