Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
ERCC3P19447 AC004158.1-201ENST00000564508 4319 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC3P19447 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
ERCC3P19447 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 SNORA74A-201ENST00000364089 198 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 RNU6-777P-201ENST00000364265 104 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 SNORA40.3-201ENST00000390964 122 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC016769.3-201ENST00000396562 315 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 MIR1286-201ENST00000408112 78 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 RNU2-66P-201ENST00000410650 161 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AL354868.1-201ENST00000417077 482 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 COX6CP15-201ENST00000426313 211 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.61□□□□□ -1.35
ERCC3P19447 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC3P19447 MTATP6P13-201ENST00000438531 667 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC100832.1-201ENST00000471945 383 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC006539.1-201ENST00000481419 501 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 RPL32P9-201ENST00000487963 407 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 OR5M14P-201ENST00000506803 618 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC093809.1-201ENST00000509155 340 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 MIR2117-201ENST00000516780 80 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 IGHV3-32-201ENST00000519182 355 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AP002748.2-201ENST00000528671 348 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC3P19447 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC044860.2-201ENST00000561005 179 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC018552.3-201ENST00000567416 561 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC015720.2-201ENST00000567709 334 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC3P19447 BBIP1P1-201ENST00000602999 279 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC009237.13-201ENST00000603193 276 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 AC093765.1-201ENST00000603758 881 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC3P19447 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC3P19447 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 AC005618.4-201ENST00000625053 554 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ERCC3P19447 STX3-208ENST00000641815 3236 ntBASIC6.61□□□□□ -1.35
ERCC3P19447 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC3P19447 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
ERCC3P19447 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ERCC3P19447 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
ERCC3P19447 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
ERCC3P19447 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ERCC3P19447 Y_RNA.516-201ENST00000384541 124 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 AL121835.1-201ENST00000404250 354 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 FCF1P9-201ENST00000412546 282 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 AC211486.3-201ENST00000412694 621 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.6□□□□□ -1.35
ERCC3P19447 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC3P19447 AL590609.2-201ENST00000421430 368 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ERCC3P19447 AL354766.1-201ENST00000423396 542 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 AL133173.1-201ENST00000423458 397 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC3P19447 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.6□□□□□ -1.35
ERCC3P19447 NPM1P34-201ENST00000428821 893 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.6□□□□□ -1.35
ERCC3P19447 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 TRBV26-201ENST00000456572 344 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 snoU13.7-201ENST00000459220 104 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 AC026410.2-201ENST00000460281 156 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 OR2AO1P-201ENST00000476497 403 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 AC109464.2-201ENST00000510242 943 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC3P19447 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC3P19447 RFPL4AP5-201ENST00000514977 504 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 RN7SKP288-201ENST00000516227 268 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms