Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MT-TL1-201ENST00000386347 75 ntBASIC6.5□□□□□ -1.37
LIG1P18858 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
LIG1P18858 CCNG1P1-201ENST00000406783 885 ntBASIC6.5□□□□□ -1.37
LIG1P18858 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.5□□□□□ -1.37
LIG1P18858 AC068533.2-201ENST00000411872 306 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AL357752.1-201ENST00000412817 349 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AL133482.1-201ENST00000415988 498 ntBASIC6.5□□□□□ -1.37
LIG1P18858 NUP35P2-201ENST00000416748 943 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AL121878.1-201ENST00000418638 859 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AIMP1P1-201ENST00000418670 937 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AL389915.1-201ENST00000422463 466 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.5□□□□□ -1.37
LIG1P18858 MTND4LP10-201ENST00000435146 291 ntBASIC6.5□□□□□ -1.37
LIG1P18858 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.5□□□□□ -1.37
LIG1P18858 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.5□□□□□ -1.37
LIG1P18858 AP006222.1-205ENST00000450734 457 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.5□□□□□ -1.37
LIG1P18858 AL122020.1-201ENST00000472287 459 ntBASIC6.5□□□□□ -1.37
LIG1P18858 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.5□□□□□ -1.37
LIG1P18858 AC073610.1-201ENST00000489971 396 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AC091951.2-201ENST00000500762 203 ntBASIC6.5□□□□□ -1.37
LIG1P18858 SNX5P1-201ENST00000505757 1041 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.5□□□□□ -1.37
LIG1P18858 PTGES3P3-201ENST00000511479 482 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AC025465.4-201ENST00000513422 638 ntBASIC6.5□□□□□ -1.37
LIG1P18858 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.5□□□□□ -1.37
LIG1P18858 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.5□□□□□ -1.37
LIG1P18858 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
LIG1P18858 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.5□□□□□ -1.37
LIG1P18858 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.5□□□□□ -1.37
LIG1P18858 SULT1C2P2-201ENST00000562517 294 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AC096996.1-201ENST00000563813 325 ntBASIC6.5□□□□□ -1.37
LIG1P18858 BPTFP1-201ENST00000579209 492 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.5□□□□□ -1.37
LIG1P18858 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.5□□□□□ -1.37
LIG1P18858 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.5□□□□□ -1.37
LIG1P18858 AC107214.2-201ENST00000608204 634 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.5□□□□□ -1.37
LIG1P18858 AP005431.1-201ENST00000618479 319 ntBASIC6.5□□□□□ -1.37
LIG1P18858 AL359697.1-201ENST00000624879 587 ntBASIC6.5□□□□□ -1.37
LIG1P18858 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 AC003973.3-201ENST00000624863 2822 ntBASIC6.5□□□□□ -1.37
LIG1P18858 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
LIG1P18858 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.5□□□□□ -1.37
LIG1P18858 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.49□□□□□ -1.37
LIG1P18858 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIG1P18858 MTND4P16-201ENST00000466108 1367 ntBASIC6.49□□□□□ -1.37
LIG1P18858 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.49□□□□□ -1.37
LIG1P18858 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.49□□□□□ -1.37
LIG1P18858 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIG1P18858 RNU6-619P-201ENST00000365146 108 ntBASIC6.49□□□□□ -1.37
LIG1P18858 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
LIG1P18858 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
LIG1P18858 RNU6-1300P-201ENST00000391046 108 ntBASIC6.49□□□□□ -1.37
LIG1P18858 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.49□□□□□ -1.37
LIG1P18858 AL035660.1-201ENST00000422041 222 ntBASIC6.49□□□□□ -1.37
LIG1P18858 AC093698.1-201ENST00000423843 571 ntBASIC6.49□□□□□ -1.37
LIG1P18858 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.49□□□□□ -1.37
LIG1P18858 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.49□□□□□ -1.37
LIG1P18858 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.49□□□□□ -1.37
LIG1P18858 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.49□□□□□ -1.37
LIG1P18858 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.49□□□□□ -1.37
LIG1P18858 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.49□□□□□ -1.37
LIG1P18858 BX248409.1-201ENST00000455497 255 ntBASIC6.49□□□□□ -1.37
LIG1P18858 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.49□□□□□ -1.37
LIG1P18858 SNORD46.2-201ENST00000516021 102 ntBASIC6.49□□□□□ -1.37
LIG1P18858 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.49□□□□□ -1.37
LIG1P18858 OR5AL2P-201ENST00000532185 920 ntBASIC6.49□□□□□ -1.37
LIG1P18858 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.49□□□□□ -1.37
LIG1P18858 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.49□□□□□ -1.37
LIG1P18858 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.49□□□□□ -1.37
LIG1P18858 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.49□□□□□ -1.37
LIG1P18858 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.49□□□□□ -1.37
LIG1P18858 AC090616.5-202ENST00000582111 297 ntBASIC6.49□□□□□ -1.37
LIG1P18858 MIR4310-201ENST00000582950 57 ntBASIC6.49□□□□□ -1.37
LIG1P18858 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.49□□□□□ -1.37
LIG1P18858 AC044792.1-201ENST00000593294 196 ntBASIC6.49□□□□□ -1.37
LIG1P18858 AC006272.2-201ENST00000594725 163 ntBASIC6.49□□□□□ -1.37
LIG1P18858 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIG1P18858 AC233280.2-201ENST00000603917 1070 ntBASIC6.49□□□□□ -1.37
LIG1P18858 AL136131.3-201ENST00000607600 188 ntBASIC6.49□□□□□ -1.37
LIG1P18858 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.49□□□□□ -1.37
LIG1P18858 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.49□□□□□ -1.37
LIG1P18858 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.49□□□□□ -1.37
LIG1P18858 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIG1P18858 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.49□□□□□ -1.37
LIG1P18858 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIG1P18858 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIG1P18858 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIG1P18858 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.49□□□□□ -1.37
LIG1P18858 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIG1P18858 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIG1P18858 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.49□□□□□ -1.37
LIG1P18858 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms