Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC115285.1-201ENST00000424879 736 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AL392003.1-201ENST00000434394 243 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.46□□□□□ -1.86
ATF1P18846 HMGB1P37-201ENST00000439613 609 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AC009263.1-201ENST00000441193 1239 ntBASIC3.46□□□□□ -1.86
ATF1P18846 RPS17P13-201ENST00000448974 407 ntBASIC3.46□□□□□ -1.86
ATF1P18846 MTCO3P16-201ENST00000454456 754 ntBASIC3.46□□□□□ -1.86
ATF1P18846 S100A11P1-201ENST00000477525 312 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AC007686.1-201ENST00000488511 463 ntBASIC3.46□□□□□ -1.86
ATF1P18846 RN7SL604P-201ENST00000492589 296 ntBASIC3.46□□□□□ -1.86
ATF1P18846 IGBP1P5-201ENST00000507524 1000 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AC108475.1-201ENST00000507880 950 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.46□□□□□ -1.86
ATF1P18846 AC034244.2-201ENST00000514668 858 ntBASIC3.46□□□□□ -1.86
ATF1P18846 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.46□□□□□ -1.86
ATF1P18846 IGHV3-32-201ENST00000519182 355 ntBASIC3.46□□□□□ -1.86
ATF1P18846 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.46□□□□□ -1.86
ATF1P18846 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.46□□□□□ -1.86
ATF1P18846 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.46□□□□□ -1.86
ATF1P18846 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.46□□□□□ -1.86
ATF1P18846 AC007424.1-203ENST00000554613 687 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.46□□□□□ -1.86
ATF1P18846 MIR4458-201ENST00000578872 75 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.46□□□□□ -1.86
ATF1P18846 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.46□□□□□ -1.86
ATF1P18846 AC244505.7-201ENST00000599675 272 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AP003117.1-201ENST00000602771 554 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AL390816.3-201ENST00000604527 1066 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AC007423.1-201ENST00000605009 627 ntBASIC3.46□□□□□ -1.86
ATF1P18846 MIR7151-201ENST00000617477 60 ntBASIC3.46□□□□□ -1.86
ATF1P18846 AP000843.1-201ENST00000624880 701 ntBASIC3.46□□□□□ -1.86
ATF1P18846 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.46□□□□□ -1.86
ATF1P18846 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.46□□□□□ -1.86
ATF1P18846 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATF1P18846 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.45□□□□□ -1.86
ATF1P18846 RPS4XP5-202ENST00000449995 1334 ntBASIC3.45□□□□□ -1.86
ATF1P18846 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ATF1P18846 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATF1P18846 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATF1P18846 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.45□□□□□ -1.86
ATF1P18846 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATF1P18846 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATF1P18846 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ATF1P18846 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATF1P18846 MIR383-201ENST00000362257 73 ntBASIC3.45□□□□□ -1.86
ATF1P18846 RNU4-39P-201ENST00000362455 127 ntBASIC3.45□□□□□ -1.86
ATF1P18846 RN7SKP177-201ENST00000410567 355 ntBASIC3.45□□□□□ -1.86
ATF1P18846 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.45□□□□□ -1.86
ATF1P18846 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.45□□□□□ -1.86
ATF1P18846 AC023141.6-201ENST00000429418 337 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AC068287.1-201ENST00000430283 295 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.45□□□□□ -1.86
ATF1P18846 MTCO3P20-201ENST00000454926 688 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.45□□□□□ -1.86
ATF1P18846 EIF2S2P4-201ENST00000461070 984 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AC010683.1-201ENST00000473673 378 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AP000926.1-201ENST00000479573 241 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.45□□□□□ -1.86
ATF1P18846 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.45□□□□□ -1.86
ATF1P18846 AC093840.1-201ENST00000511599 336 ntBASIC3.45□□□□□ -1.86
ATF1P18846 IGKV2D-23-201ENST00000518179 286 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.45□□□□□ -1.86
ATF1P18846 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.45□□□□□ -1.86
ATF1P18846 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.45□□□□□ -1.86
ATF1P18846 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.45□□□□□ -1.86
ATF1P18846 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.45□□□□□ -1.86
ATF1P18846 uc_338.32-201ENST00000615087 172 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AC114781.5-201ENST00000615297 108 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AL121890.3-201ENST00000618494 516 ntBASIC3.45□□□□□ -1.86
ATF1P18846 MIR3653-201ENST00000625572 110 ntBASIC3.45□□□□□ -1.86
ATF1P18846 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.45□□□□□ -1.86
ATF1P18846 AC009452.1-201ENST00000640823 606 ntBASIC3.45□□□□□ -1.86
ATF1P18846 LARP1BP1-201ENST00000506036 1359 ntBASIC3.45□□□□□ -1.86
ATF1P18846 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
ATF1P18846 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATF1P18846 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
ATF1P18846 AC007529.1-201ENST00000418574 2178 ntBASIC3.45□□□□□ -1.86
ATF1P18846 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
ATF1P18846 AC090229.1-201ENST00000590983 1609 ntBASIC3.44□□□□□ -1.86
ATF1P18846 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.44□□□□□ -1.86
ATF1P18846 AC009951.1-201ENST00000623674 2614 ntBASIC3.44□□□□□ -1.86
ATF1P18846 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 AC095050.2-201ENST00000510748 1458 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.44□□□□□ -1.86
ATF1P18846 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.44□□□□□ -1.86
ATF1P18846 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ATF1P18846 U3.22-201ENST00000391120 215 ntBASIC3.44□□□□□ -1.86
ATF1P18846 HMGB3P19-201ENST00000403971 560 ntBASIC3.44□□□□□ -1.86
ATF1P18846 HSPE1P8-201ENST00000406997 288 ntBASIC3.44□□□□□ -1.86
ATF1P18846 HSPE1P12-201ENST00000412576 301 ntBASIC3.44□□□□□ -1.86
ATF1P18846 RPL7AP73-201ENST00000413490 353 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.44□□□□□ -1.86
ATF1P18846 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.44□□□□□ -1.86
ATF1P18846 MTND4P11-201ENST00000417020 1058 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms