Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC7.52□□□□□ -1.2
CSB-PGBD3P0DP91 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CSB-PGBD3P0DP91 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.52□□□□□ -1.2
CSB-PGBD3P0DP91 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 RNA5SP335-201ENST00000363817 110 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 RPS3AP23-201ENST00000401762 784 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AL590004.1-201ENST00000405321 300 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 RN7SKP56-201ENST00000410513 331 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 RPL21P111-201ENST00000418453 477 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC007568.1-201ENST00000422912 471 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC093698.1-201ENST00000423843 571 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC016027.5-201ENST00000427227 210 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 OR7E125P-201ENST00000443450 846 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AL161722.1-201ENST00000446972 1032 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 OR6K1P-201ENST00000456766 971 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 ARPC3P2-201ENST00000457786 533 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC008802.1-201ENST00000519121 791 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 TRAV15-201ENST00000556680 249 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 MIR4436B2-201ENST00000581415 91 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 MIR4436B1-201ENST00000583272 91 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 KC877982.1-201ENST00000602313 470 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.812-201ENST00000610788 101 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.784-201ENST00000613803 101 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.787-201ENST00000616522 101 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.780-201ENST00000617336 101 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.801-201ENST00000619005 101 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AL158209.2-201ENST00000619266 216 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC002550.2-201ENST00000621246 394 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC124864.2-201ENST00000624736 186 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 CDRT1-208ENST00000630868 794 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 CR383658.2-201ENST00000547576 1525 ntBASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.52□□□□□ -1.21
CSB-PGBD3P0DP91 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.160-201ENST00000363677 92 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 MIR130A-201ENST00000385274 89 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AL589647.1-201ENST00000402485 466 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AL121878.1-201ENST00000418638 859 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 LINC00993-201ENST00000420453 540 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 OR6D1P-201ENST00000436165 939 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AL512286.1-201ENST00000439244 400 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 PSPHP1-201ENST00000450062 261 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 HMGB1P4-201ENST00000455362 567 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AC112206.1-201ENST00000468416 477 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 DUTP1-201ENST00000493631 470 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 HMGB1P44-201ENST00000508597 572 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AC091133.4-201ENST00000511142 308 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AC122134.1-201ENST00000565664 1104 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AL391840.1-201ENST00000571144 367 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AL442067.2-201ENST00000614033 363 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 MTND5P42-201ENST00000637720 498 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms