Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CTSDP07339 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CTSDP07339 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTSDP07339 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTSDP07339 AL161909.1-201ENST00000397390 712 ntBASIC3.21□□□□□ -1.9
CTSDP07339 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSDP07339 AC114814.2-201ENST00000419195 485 ntBASIC3.21□□□□□ -1.9
CTSDP07339 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTSDP07339 FAR2P4-202ENST00000425399 584 ntBASIC3.21□□□□□ -1.9
CTSDP07339 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.21□□□□□ -1.9
CTSDP07339 USP9YP7-201ENST00000436723 430 ntBASIC3.21□□□□□ -1.9
CTSDP07339 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTSDP07339 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.21□□□□□ -1.9
CTSDP07339 USP9YP32-201ENST00000452432 430 ntBASIC3.21□□□□□ -1.9
CTSDP07339 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSDP07339 AC084198.1-201ENST00000477747 402 ntBASIC3.21□□□□□ -1.9
CTSDP07339 TRBV8-1-201ENST00000481590 279 ntBASIC3.21□□□□□ -1.9
CTSDP07339 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSDP07339 AC087369.1-201ENST00000520775 996 ntBASIC3.21□□□□□ -1.9
CTSDP07339 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSDP07339 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSDP07339 OR4A12P-201ENST00000530847 918 ntBASIC3.21□□□□□ -1.9
CTSDP07339 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSDP07339 AL121839.1-201ENST00000556233 1185 ntBASIC3.21□□□□□ -1.9
CTSDP07339 CYP2C60P-201ENST00000566088 139 ntBASIC3.21□□□□□ -1.9
CTSDP07339 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSDP07339 AC010680.3-201ENST00000604215 520 ntBASIC3.21□□□□□ -1.9
CTSDP07339 AL137849.1-201ENST00000604767 169 ntBASIC3.21□□□□□ -1.9
CTSDP07339 MIR6868-201ENST00000611215 58 ntBASIC3.21□□□□□ -1.9
CTSDP07339 RNVU1-4-201ENST00000612985 164 ntBASIC3.21□□□□□ -1.9
CTSDP07339 AC114781.5-201ENST00000615297 108 ntBASIC3.21□□□□□ -1.9
CTSDP07339 AC020978.9-201ENST00000624380 1141 ntBASIC3.21□□□□□ -1.9
CTSDP07339 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.21□□□□□ -1.9
CTSDP07339 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.21□□□□□ -1.9
CTSDP07339 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.21□□□□□ -1.9
CTSDP07339 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.21□□□□□ -1.9
CTSDP07339 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTSDP07339 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTSDP07339 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTSDP07339 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CTSDP07339 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CTSDP07339 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTSDP07339 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTSDP07339 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSDP07339 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSDP07339 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CTSDP07339 AL136964.1-201ENST00000622038 2990 ntBASIC3.2□□□□□ -1.9
CTSDP07339 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.2□□□□□ -1.9
CTSDP07339 RNA5SP443-201ENST00000363083 132 ntBASIC3.2□□□□□ -1.9
CTSDP07339 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSDP07339 AC104297.1-201ENST00000393779 870 ntBASIC3.2□□□□□ -1.9
CTSDP07339 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTSDP07339 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.2□□□□□ -1.9
CTSDP07339 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSDP07339 AL590806.1-201ENST00000415818 853 ntBASIC3.2□□□□□ -1.9
CTSDP07339 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.2□□□□□ -1.9
CTSDP07339 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTSDP07339 HIGD1AP12-201ENST00000427832 281 ntBASIC3.2□□□□□ -1.9
CTSDP07339 MOB1AP1-201ENST00000430903 535 ntBASIC3.2□□□□□ -1.9
CTSDP07339 AC016712.1-201ENST00000431088 378 ntBASIC3.2□□□□□ -1.9
CTSDP07339 AL138787.1-202ENST00000437804 898 ntBASIC3.2□□□□□ -1.9
CTSDP07339 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSDP07339 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CTSDP07339 RPS29P31-201ENST00000446147 164 ntBASIC3.2□□□□□ -1.9
CTSDP07339 NDUFA5P9-201ENST00000472609 340 ntBASIC3.2□□□□□ -1.9
CTSDP07339 RNA5SP309-201ENST00000516670 106 ntBASIC3.2□□□□□ -1.9
CTSDP07339 AC008489.1-201ENST00000524271 483 ntBASIC3.2□□□□□ -1.9
CTSDP07339 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.2□□□□□ -1.9
CTSDP07339 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSDP07339 SNORD39.2-201ENST00000579995 76 ntBASIC3.2□□□□□ -1.9
CTSDP07339 AF230666.2-201ENST00000602328 725 ntBASIC3.2□□□□□ -1.9
CTSDP07339 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.2□□□□□ -1.9
CTSDP07339 ARF4P1-201ENST00000605447 541 ntBASIC3.2□□□□□ -1.9
CTSDP07339 AL023583.1-201ENST00000607518 1143 ntBASIC3.2□□□□□ -1.9
CTSDP07339 AC096586.2-201ENST00000610260 441 ntBASIC3.2□□□□□ -1.9
CTSDP07339 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTSDP07339 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.2□□□□□ -1.9
CTSDP07339 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTSDP07339 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTSDP07339 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTSDP07339 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTSDP07339 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSDP07339 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTSDP07339 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTSDP07339 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTSDP07339 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTSDP07339 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
CTSDP07339 MIR383-201ENST00000362257 73 ntBASIC3.19□□□□□ -1.9
CTSDP07339 RNA5SP366-201ENST00000365454 123 ntBASIC3.19□□□□□ -1.9
CTSDP07339 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 MIR199A2-201ENST00000385289 110 ntBASIC3.19□□□□□ -1.9
CTSDP07339 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 PTP4A1P5-201ENST00000420305 455 ntBASIC3.19□□□□□ -1.9
CTSDP07339 RPL23AP38-201ENST00000423801 469 ntBASIC3.19□□□□□ -1.9
CTSDP07339 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.19□□□□□ -1.9
CTSDP07339 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.19□□□□□ -1.9
CTSDP07339 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.19□□□□□ -1.9
CTSDP07339 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms