Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC241377.1-201ENST00000619797 406 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A2P05997 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A2P05997 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A2P05997 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A2P05997 AC009229.4-201ENST00000623854 1947 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL5A2P05997 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.94□□□□□ -1.62
COL5A2P05997 BOLA3P4-201ENST00000418151 400 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AC013470.3-201ENST00000420252 1194 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 FAM204CP-201ENST00000424489 642 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.94□□□□□ -1.62
COL5A2P05997 RPL12P18-201ENST00000437175 325 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 ARL4AP3-201ENST00000441452 574 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.94□□□□□ -1.62
COL5A2P05997 AL591363.1-201ENST00000450091 483 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.94□□□□□ -1.62
COL5A2P05997 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.94□□□□□ -1.62
COL5A2P05997 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.94□□□□□ -1.62
COL5A2P05997 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.94□□□□□ -1.62
COL5A2P05997 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.94□□□□□ -1.62
COL5A2P05997 AC010591.1-201ENST00000603941 649 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AL354696.1-201ENST00000614652 497 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AP000553.6-201ENST00000641242 118 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL5A2P05997 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A2P05997 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.93□□□□□ -1.62
COL5A2P05997 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL5A2P05997 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL5A2P05997 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL5A2P05997 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.93□□□□□ -1.62
COL5A2P05997 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
COL5A2P05997 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
COL5A2P05997 Z95331.1-201ENST00000623075 23112 ntBASIC4.93□□□□□ -1.62
COL5A2P05997 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.93□□□□□ -1.62
COL5A2P05997 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.93□□□□□ -1.62
COL5A2P05997 RANP7-201ENST00000418085 644 ntBASIC4.93□□□□□ -1.62
COL5A2P05997 AC005019.1-201ENST00000436455 431 ntBASIC4.93□□□□□ -1.62
COL5A2P05997 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.93□□□□□ -1.62
COL5A2P05997 MTND6P6-201ENST00000478031 263 ntBASIC4.93□□□□□ -1.62
COL5A2P05997 AL049873.1-201ENST00000480540 376 ntBASIC4.93□□□□□ -1.62
COL5A2P05997 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.93□□□□□ -1.62
COL5A2P05997 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.93□□□□□ -1.62
COL5A2P05997 AC133552.5-201ENST00000604266 540 ntBASIC4.93□□□□□ -1.62
COL5A2P05997 AC006077.1-201ENST00000604746 343 ntBASIC4.93□□□□□ -1.62
COL5A2P05997 AC011816.2-201ENST00000607089 556 ntBASIC4.93□□□□□ -1.62
COL5A2P05997 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL5A2P05997 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
COL5A2P05997 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL5A2P05997 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.92□□□□□ -1.62
COL5A2P05997 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL5A2P05997 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.92□□□□□ -1.62
COL5A2P05997 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL5A2P05997 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL5A2P05997 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.92□□□□□ -1.62
COL5A2P05997 USP9YP19-201ENST00000412165 485 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 DBIP2-201ENST00000419076 262 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 MTND2P39-201ENST00000457230 764 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.92□□□□□ -1.62
COL5A2P05997 AGGF1P3-201ENST00000493675 1213 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 RPL31P61-201ENST00000496160 376 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.92□□□□□ -1.62
COL5A2P05997 YPEL5P2-201ENST00000605553 359 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 AC144521.1-201ENST00000607148 956 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.92□□□□□ -1.62
COL5A2P05997 AC139426.3-201ENST00000605648 2059 ntBASIC4.92□□□□□ -1.62
COL5A2P05997 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.92□□□□□ -1.62
COL5A2P05997 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.91□□□□□ -1.62
COL5A2P05997 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A2P05997 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.91□□□□□ -1.62
COL5A2P05997 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A2P05997 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.91□□□□□ -1.62
COL5A2P05997 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
COL5A2P05997 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A2P05997 SEC63P1-201ENST00000425785 1258 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 RN7SL585P-201ENST00000470538 280 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 OR52A4P-202ENST00000481634 799 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 RPL32P34-201ENST00000486380 400 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 RNU2-27P-201ENST00000516185 142 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.91□□□□□ -1.62
COL5A2P05997 GNRHR2P1-201ENST00000555315 631 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 MIMT1-201ENST00000597105 1050 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 OR51C1P-201ENST00000608504 942 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 AL591424.2-201ENST00000617023 128 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 CR392039.4-201ENST00000624968 501 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 AC138627.1-204ENST00000641894 765 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
COL5A2P05997 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A2P05997 AL078595.2-201ENST00000605309 1780 ntBASIC4.91□□□□□ -1.62
COL5A2P05997 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.91□□□□□ -1.62
COL5A2P05997 AL035425.3-201ENST00000564206 4996 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
COL5A2P05997 CDY11P-201ENST00000447168 1651 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
COL5A2P05997 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.9□□□□□ -1.62
COL5A2P05997 SNORA40.4-201ENST00000390971 128 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms