Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 KCTD9P3-201ENST00000434597 1169 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 ACTR3P2-201ENST00000439585 1257 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN2BO60939 VN1R25P-201ENST00000443385 738 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN2BO60939 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN2BO60939 VN1R40P-201ENST00000455196 941 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 RPL5P13-201ENST00000462840 709 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN2BO60939 RPL7P24-201ENST00000493052 752 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN2BO60939 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN2BO60939 RAB9BP1-201ENST00000519581 626 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN2BO60939 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.82□□□□□ -1.8
SCN2BO60939 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN2BO60939 GNRHR2P1-201ENST00000555315 631 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN2BO60939 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN2BO60939 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN2BO60939 AC027281.1-201ENST00000574178 758 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 MIR5096-201ENST00000583713 70 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 MRPS35P3-201ENST00000603189 709 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN2BO60939 AL355816.1-201ENST00000607951 118 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AP000255.1-201ENST00000610276 676 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AC114781.5-201ENST00000615297 108 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AL590410.1-201ENST00000617925 333 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AL121890.3-201ENST00000618494 516 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SCN2BO60939 AC011944.2-201ENST00000624440 683 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN2BO60939 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN2BO60939 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN2BO60939 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN2BO60939 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN2BO60939 FAM35DP-201ENST00000323387 2712 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN2BO60939 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCN2BO60939 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN2BO60939 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN2BO60939 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN2BO60939 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SCN2BO60939 RNU4-25P-201ENST00000410569 230 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN2BO60939 BTF3P9-201ENST00000418784 283 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.81□□□□□ -1.8
SCN2BO60939 UBE2V2P1-201ENST00000434717 398 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN2BO60939 MTCO3P17-201ENST00000443775 513 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN2BO60939 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN2BO60939 CYCSP42-201ENST00000450823 238 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.81□□□□□ -1.8
SCN2BO60939 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN2BO60939 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.81□□□□□ -1.8
SCN2BO60939 AC087385.1-201ENST00000475062 312 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 RPL29P14-201ENST00000495837 428 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 HMGB1P21-201ENST00000502313 581 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.81□□□□□ -1.8
SCN2BO60939 AC108475.1-201ENST00000507880 950 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AC106806.2-201ENST00000509365 500 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN2BO60939 RN7SKP82-201ENST00000516786 223 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCN2BO60939 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN2BO60939 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN2BO60939 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN2BO60939 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
SCN2BO60939 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN2BO60939 AC005255.1-201ENST00000593748 216 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 ARF4P1-201ENST00000605447 541 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 MIR486-1-201ENST00000612171 68 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AC099669.2-201ENST00000616549 437 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 AC010435.1-201ENST00000623353 1177 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 MIR3653-201ENST00000625572 110 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 RNF6P1-201ENST00000444889 1784 ntBASIC3.81□□□□□ -1.8
SCN2BO60939 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN2BO60939 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN2BO60939 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN2BO60939 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SCN2BO60939 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN2BO60939 LARP1BP1-201ENST00000506036 1359 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN2BO60939 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN2BO60939 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN2BO60939 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN2BO60939 SNORD35B-201ENST00000363660 87 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 HMGB3P19-201ENST00000403971 560 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 MIR1183-201ENST00000408856 89 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN2BO60939 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN2BO60939 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN2BO60939 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.8□□□□□ -1.8
SCN2BO60939 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.8□□□□□ -1.8
SCN2BO60939 AC073143.1-201ENST00000436316 395 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 AC083863.1-201ENST00000438811 231 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN2BO60939 FABP3P2-201ENST00000453169 399 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms