Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CYCSP6-201ENST00000434498 302 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.03□□□□□ -1.6
PROM1O43490 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.03□□□□□ -1.6
PROM1O43490 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.03□□□□□ -1.6
PROM1O43490 OR52E3P-201ENST00000452083 936 ntBASIC5.03□□□□□ -1.6
PROM1O43490 DNAJB5P1-201ENST00000454004 806 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC079168.1-201ENST00000458741 345 ntBASIC5.03□□□□□ -1.6
PROM1O43490 TRBV8-2-201ENST00000475637 270 ntBASIC5.03□□□□□ -1.6
PROM1O43490 RPL7P16-201ENST00000479738 738 ntBASIC5.03□□□□□ -1.6
PROM1O43490 RPL5P22-201ENST00000480199 884 ntBASIC5.03□□□□□ -1.6
PROM1O43490 GAPDHP39-201ENST00000481866 979 ntBASIC5.03□□□□□ -1.6
PROM1O43490 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 RPL15P21-201ENST00000495592 567 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC008953.1-201ENST00000497334 318 ntBASIC5.03□□□□□ -1.6
PROM1O43490 MTATP6P22-201ENST00000507369 598 ntBASIC5.03□□□□□ -1.6
PROM1O43490 HSPE1P23-201ENST00000509838 286 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.03□□□□□ -1.6
PROM1O43490 RNA5SP373-201ENST00000517271 95 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.03□□□□□ -1.6
PROM1O43490 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.03□□□□□ -1.6
PROM1O43490 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 AC092709.1-201ENST00000521355 1045 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.03□□□□□ -1.6
PROM1O43490 OR4C2P-201ENST00000530855 1064 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AP000873.5-201ENST00000533906 236 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC005832.3-201ENST00000537929 631 ntBASIC5.03□□□□□ -1.6
PROM1O43490 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 HAUS8P1-201ENST00000549005 542 ntBASIC5.03□□□□□ -1.6
PROM1O43490 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 AC011260.1-201ENST00000578420 472 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 MIR4801-201ENST00000582704 82 ntBASIC5.03□□□□□ -1.6
PROM1O43490 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 EIF1P6-201ENST00000600054 334 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 AC103881.1-201ENST00000603476 538 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AL162431.4-201ENST00000604674 411 ntBASIC5.03□□□□□ -1.6
PROM1O43490 RBM11P1-201ENST00000604951 799 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC010200.2-201ENST00000605098 235 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AL353726.1-201ENST00000614041 1000 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC015540.1-201ENST00000615828 501 ntBASIC5.03□□□□□ -1.6
PROM1O43490 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 AC006927.3-201ENST00000638789 384 ntBASIC5.03□□□□□ -1.6
PROM1O43490 CASC19-264ENST00000641912 1184 ntBASIC5.03□□□□□ -1.6
PROM1O43490 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.03□□□□□ -1.6
PROM1O43490 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 ADAM5-202ENST00000399789 1942 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC104260.2-201ENST00000623551 3497 ntBASIC5.03□□□□□ -1.6
PROM1O43490 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PROM1O43490 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.02□□□□□ -1.61
PROM1O43490 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.02□□□□□ -1.61
PROM1O43490 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
PROM1O43490 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.02□□□□□ -1.61
PROM1O43490 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 DCAF13P3-201ENST00000561147 1334 ntBASIC5.02□□□□□ -1.61
PROM1O43490 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
PROM1O43490 Z99496.1-201ENST00000469424 1477 ntBASIC5.02□□□□□ -1.61
PROM1O43490 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.02□□□□□ -1.61
PROM1O43490 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.02□□□□□ -1.61
PROM1O43490 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PROM1O43490 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PROM1O43490 HMGB1P5-201ENST00000255320 642 ntBASIC5.02□□□□□ -1.61
PROM1O43490 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 U3.4-201ENST00000363352 213 ntBASIC5.02□□□□□ -1.61
PROM1O43490 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 OR1L6-202ENST00000373684 1044 ntBASIC5.02□□□□□ -1.61
PROM1O43490 RNU6-517P-201ENST00000384362 110 ntBASIC5.02□□□□□ -1.61
PROM1O43490 SNORD65.1-201ENST00000390889 71 ntBASIC5.02□□□□□ -1.61
PROM1O43490 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.02□□□□□ -1.61
PROM1O43490 RPL7P8-201ENST00000411964 730 ntBASIC5.02□□□□□ -1.61
PROM1O43490 TPT1P2-201ENST00000413105 503 ntBASIC5.02□□□□□ -1.61
PROM1O43490 RPS15AP38-201ENST00000413110 372 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 RPL35AP24-201ENST00000413846 330 ntBASIC5.02□□□□□ -1.61
PROM1O43490 ELOCP17-201ENST00000414751 326 ntBASIC5.02□□□□□ -1.61
PROM1O43490 RAD23BP2-201ENST00000416003 1207 ntBASIC5.02□□□□□ -1.61
PROM1O43490 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.02□□□□□ -1.61
PROM1O43490 CENPIP1-201ENST00000425713 902 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 HSPD1P12-201ENST00000429127 1069 ntBASIC5.02□□□□□ -1.61
PROM1O43490 MTCO1P54-201ENST00000430139 712 ntBASIC5.02□□□□□ -1.61
PROM1O43490 SEPT7P5-201ENST00000434048 306 ntBASIC5.02□□□□□ -1.61
PROM1O43490 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.02□□□□□ -1.61
PROM1O43490 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms