Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MTND2P23-201ENST00000422990 651 ntBASIC6.28□□□□□ -1.4
SOX1O00570 HMGB3P9-201ENST00000441799 583 ntBASIC6.28□□□□□ -1.4
SOX1O00570 MTCYBP6-201ENST00000441810 138 ntBASIC6.28□□□□□ -1.4
SOX1O00570 RPS7P3-201ENST00000443360 580 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.28□□□□□ -1.4
SOX1O00570 AC239798.3-201ENST00000454459 408 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 MTND1P3-201ENST00000484956 952 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AC009120.1-201ENST00000493458 473 ntBASIC6.28□□□□□ -1.4
SOX1O00570 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 RNU6-327P-201ENST00000516270 127 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX1O00570 TOMM20P2-201ENST00000540082 421 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.28□□□□□ -1.4
SOX1O00570 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.28□□□□□ -1.4
SOX1O00570 AP001180.3-201ENST00000582221 145 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AL133338.2-201ENST00000604292 736 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AC104687.2-201ENST00000604442 342 ntBASIC6.28□□□□□ -1.4
SOX1O00570 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SOX1O00570 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SOX1O00570 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 AC009268.2-201ENST00000621925 457 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AC132068.1-201ENST00000623805 459 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.28□□□□□ -1.4
SOX1O00570 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SOX1O00570 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 AL033543.1-201ENST00000623440 13454 ntBASIC6.28□□□□□ -1.4
SOX1O00570 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SOX1O00570 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX1O00570 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SOX1O00570 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SOX1O00570 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 GTF2IP4-201ENST00000453092 2054 ntBASIC6.27□□□□□ -1.41
SOX1O00570 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SOX1O00570 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX1O00570 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SOX1O00570 ASNSP1-204ENST00000641977 1664 ntBASIC6.27□□□□□ -1.41
SOX1O00570 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SOX1O00570 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SOX1O00570 CCT4P2-201ENST00000233836 1548 ntBASIC6.27□□□□□ -1.41
SOX1O00570 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SOX1O00570 SNORD81.2-201ENST00000365153 76 ntBASIC6.27□□□□□ -1.41
SOX1O00570 SNORA51.8-201ENST00000384234 132 ntBASIC6.27□□□□□ -1.41
SOX1O00570 Z97832.1-201ENST00000402490 328 ntBASIC6.27□□□□□ -1.41
SOX1O00570 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX1O00570 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX1O00570 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX1O00570 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX1O00570 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX1O00570 AC140076.1-201ENST00000449897 361 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.27□□□□□ -1.41
SOX1O00570 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX1O00570 AC092324.1-201ENST00000468671 324 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC017015.1-201ENST00000477387 286 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC098583.1-201ENST00000480875 255 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX1O00570 RNU6-150P-201ENST00000516237 95 ntBASIC6.27□□□□□ -1.41
SOX1O00570 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.27□□□□□ -1.41
SOX1O00570 AP000790.1-201ENST00000528891 737 ntBASIC6.27□□□□□ -1.41
SOX1O00570 HPRT1P3-201ENST00000539521 576 ntBASIC6.27□□□□□ -1.41
SOX1O00570 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX1O00570 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX1O00570 AC078814.3-201ENST00000553036 491 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AL121579.2-201ENST00000555466 590 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC090515.3-201ENST00000560431 315 ntBASIC6.27□□□□□ -1.41
SOX1O00570 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SOX1O00570 AC015917.1-201ENST00000579654 510 ntBASIC6.27□□□□□ -1.41
SOX1O00570 CKS1BP3-201ENST00000600888 237 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AL020997.2-201ENST00000602607 184 ntBASIC6.27□□□□□ -1.41
SOX1O00570 COX6CP4-201ENST00000605798 228 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC011816.2-201ENST00000607089 556 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC093788.1-201ENST00000609356 927 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC093838.1-201ENST00000613014 469 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC015871.5-202ENST00000623252 701 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AL353662.3-201ENST00000625131 237 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AL132640.3-201ENST00000630473 177 ntBASIC6.27□□□□□ -1.41
SOX1O00570 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SOX1O00570 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX1O00570 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms