Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CR381670.1-201ENST00000624291 1693 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AP002001.2-201ENST00000529025 1469 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC126755.2-208ENST00000327792 462 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC138969.1-213ENST00000331436 462 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC108032.1-201ENST00000416706 207 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC099336.2-201ENST00000422457 254 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC009480.2-201ENST00000422916 432 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AL353597.2-202ENST00000434901 373 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 TBCAP1-201ENST00000436520 327 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC239809.1-201ENST00000450470 217 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC098824.1-201ENST00000453565 980 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC099560.2-201ENST00000457554 255 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 RNA5SP179-201ENST00000517284 121 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 OR4A12P-201ENST00000530847 918 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 RN7SL600P-201ENST00000581811 299 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 IPO5P1-202ENST00000600039 287 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AC091167.4-201ENST00000605079 184 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 AL136370.1-201ENST00000608166 691 ntBASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM49D1C9J1S8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC093719.1-202ENST00000392735 373 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 RPS27AP11-201ENST00000402798 447 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 OR5AW1P-201ENST00000426334 1006 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AL390879.2-203ENST00000426943 1121 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 MTATP6P11-201ENST00000428071 670 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC023141.6-201ENST00000429418 337 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC016712.1-201ENST00000431088 378 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AL356276.2-201ENST00000435919 558 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 SKP1P1-201ENST00000438081 489 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 MTCO3P16-201ENST00000454456 754 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 RPL31P53-201ENST00000457065 348 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 APOOP2-201ENST00000461561 539 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC093840.1-201ENST00000511599 336 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC034205.1-201ENST00000520621 638 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 SUMO2P20-201ENST00000520803 283 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC092851.1-201ENST00000535964 478 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 YPEL5P3-201ENST00000547227 352 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC012414.2-201ENST00000559474 187 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC090312.1-201ENST00000580637 348 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AL133247.2-201ENST00000603236 482 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC092574.1-201ENST00000609771 420 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC004241.3-201ENST00000611728 517 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 MIR6810-201ENST00000622701 70 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AL445437.1-201ENST00000623157 3087 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 AC005261.4-201ENST00000600047 1385 ntBASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM49D1C9J1S8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms