Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 AC069307.1-201ENST00000602820 447 ntBASIC5.23□□□□□ -1.57
CCDC78A2IDD5 AC078795.2-201ENST00000602835 1252 ntBASIC5.23□□□□□ -1.57
CCDC78A2IDD5 AL137072.1-201ENST00000603444 466 ntBASIC5.23□□□□□ -1.57
CCDC78A2IDD5 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 AC087752.4-201ENST00000605911 462 ntBASIC5.23□□□□□ -1.57
CCDC78A2IDD5 AL139418.1-201ENST00000613613 177 ntBASIC5.23□□□□□ -1.57
CCDC78A2IDD5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 OR5BE1P-202ENST00000641168 1176 ntBASIC5.23□□□□□ -1.57
CCDC78A2IDD5 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 AC096656.1-201ENST00000623826 1364 ntBASIC5.23□□□□□ -1.57
CCDC78A2IDD5 ZNF833P-201ENST00000424938 1494 ntBASIC5.23□□□□□ -1.57
CCDC78A2IDD5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC78A2IDD5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 HMGB1P5-201ENST00000255320 642 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 U3.2-201ENST00000362981 210 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RNA5SP90-201ENST00000364801 99 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RNU6-98P-201ENST00000384173 107 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 SNORA67-201ENST00000384423 137 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 Y_RNA.553-201ENST00000384670 102 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RPL21P67-201ENST00000402896 478 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 MIR1286-201ENST00000408112 78 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RNU2-50P-201ENST00000410494 143 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AP000534.2-201ENST00000412729 568 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RPS15AP38-201ENST00000413110 372 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 CDY14P-201ENST00000431260 1014 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AL031663.1-201ENST00000437445 219 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 PTMAP6-201ENST00000439110 327 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RPS29P10-201ENST00000439197 166 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 CDY23P-201ENST00000451661 1014 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RFC5P1-201ENST00000454419 874 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC073522.1-201ENST00000483312 377 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RPS24P16-201ENST00000497294 392 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC021146.8-201ENST00000507455 733 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 PGAM1P13-201ENST00000507497 754 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RNU2-30P-201ENST00000516209 141 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AP000873.5-201ENST00000533906 236 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC044860.2-201ENST00000561005 179 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC127024.5-201ENST00000580085 462 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RSL24D1P11-201ENST00000591045 491 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AL390838.2-201ENST00000602394 274 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC011453.2-201ENST00000603737 729 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AL136363.2-201ENST00000604173 851 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RBM11P1-201ENST00000604951 799 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AL139286.2-201ENST00000606838 396 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 AC009878.1-201ENST00000621819 340 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.22□□□□□ -1.57
CCDC78A2IDD5 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC78A2IDD5 RNF6P1-201ENST00000444889 1784 ntBASIC5.21□□□□□ -1.57
CCDC78A2IDD5 AL355852.1-201ENST00000454081 1771 ntBASIC5.21□□□□□ -1.57
CCDC78A2IDD5 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.21□□□□□ -1.57
CCDC78A2IDD5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC78A2IDD5 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC78A2IDD5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC78A2IDD5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC78A2IDD5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
CCDC78A2IDD5 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC78A2IDD5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC78A2IDD5 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC78A2IDD5 U3.3-201ENST00000362986 216 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms