Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPDC1A2A3K4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPDC1A2A3K4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPDC1A2A3K4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPDC1A2A3K4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPDC1A2A3K4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 SNORA66-201ENST00000384792 133 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AL161449.1-201ENST00000414531 1199 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 RPS24P8-201ENST00000431490 402 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 PPIAP17-201ENST00000438507 471 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AL138878.2-201ENST00000440581 1241 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AL450023.3-201ENST00000440592 271 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 TAF9P1-201ENST00000445421 515 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 KNOP1P3-201ENST00000446933 426 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 BTF3P6-201ENST00000448054 499 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC104306.1-201ENST00000449702 371 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AL356981.1-201ENST00000454879 684 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 TAF9P2-201ENST00000454958 515 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 RPS17P2-201ENST00000461663 408 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 RPL7P1-201ENST00000468161 747 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 RPL7P9-201ENST00000468715 747 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC147055.4-201ENST00000504399 745 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC010350.1-201ENST00000504908 231 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC108471.1-201ENST00000513977 287 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 RNU6-678P-201ENST00000516832 109 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 CDH12P4-201ENST00000517835 295 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 CDH12P3-201ENST00000517935 295 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 CDH12P1-201ENST00000518435 295 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 MTCYBP20-201ENST00000524239 1129 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC103881.1-201ENST00000603476 538 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC005084.1-201ENST00000605160 304 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AL353600.1-201ENST00000608148 251 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 AC016717.3-201ENST00000624730 554 ntBASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPDC1A2A3K4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 RN7SKP95-201ENST00000362860 303 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 RNU6-621P-201ENST00000364752 109 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 Y_RNA.311-201ENST00000365068 96 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 RNU6-317P-201ENST00000384031 107 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 MIR217-201ENST00000384817 110 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 MGAT2P2-201ENST00000427194 797 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 RPL7P4-203ENST00000430239 730 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 PRPF38AP2-201ENST00000438179 851 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 HMGB1P4-201ENST00000455362 567 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 MTND1P16-201ENST00000465177 898 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AL161747.1-201ENST00000480068 358 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 ACTG1P13-201ENST00000486987 1043 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AC069304.1-201ENST00000491593 704 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 AC112198.1-201ENST00000505369 1220 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 COX6B1P5-201ENST00000509843 249 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 SNORA70.11-201ENST00000515987 138 ntBASIC5.86□□□□□ -1.47
PTPDC1A2A3K4 SNORA70.13-201ENST00000516116 138 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms