Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CSNK1G3Q9Y6M4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CSNK1G3Q9Y6M4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.32□□□□□ -1.72
CSNK1G3Q9Y6M4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSNK1G3Q9Y6M4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSNK1G3Q9Y6M4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.32□□□□□ -1.72
CSNK1G3Q9Y6M4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AP000568.1-201ENST00000282964 442 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 MIR383-201ENST00000362257 73 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 RNU4-74P-201ENST00000411280 161 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AL024507.1-201ENST00000412741 274 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 RAC1P3-201ENST00000416129 580 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 RPS7P7-201ENST00000463499 571 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC007537.2-201ENST00000472093 511 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 SETP6-201ENST00000479329 568 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC107398.1-201ENST00000486904 505 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 OR5H3P-201ENST00000502817 919 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 CDH12P2-201ENST00000504393 298 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC112518.2-201ENST00000508565 425 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC133963.2-201ENST00000513686 578 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC104229.1-201ENST00000561364 255 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC091178.1-203ENST00000584586 279 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC068620.3-201ENST00000602749 560 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 MIR8059-201ENST00000620427 81 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC139769.1-204ENST00000472297 1931 ntBASIC4.31□□□□□ -1.72
CSNK1G3Q9Y6M4 AC093535.2-201ENST00000624769 2326 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 RNU4-7P-201ENST00000364758 141 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 RNU6-178P-201ENST00000384631 104 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 RPL22P22-201ENST00000395439 379 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AL022722.2-201ENST00000402519 180 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 TATDN1P1-201ENST00000414123 891 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 XKRYP4-201ENST00000414395 483 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 SNRPFP1-201ENST00000414761 252 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AL139095.3-201ENST00000419672 1203 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC062016.2-201ENST00000420950 676 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 RPL23AP38-201ENST00000423801 469 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AL645931.1-201ENST00000439737 410 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 HSFY6P-201ENST00000445573 403 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 XKRYP5-201ENST00000449659 483 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 RPL7P55-201ENST00000450522 746 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 VN1R32P-201ENST00000452234 905 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 RPL7AP52-201ENST00000458096 790 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 PSMC1P13-201ENST00000458195 985 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC018635.1-201ENST00000468292 1030 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC108475.1-201ENST00000507880 950 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 RNU6-1308P-201ENST00000516817 103 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC109635.6-201ENST00000525487 1113 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 TRAV8-5-201ENST00000537369 341 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC245884.10-201ENST00000597355 337 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AC025946.2-201ENST00000603398 234 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AL139395.1-201ENST00000603662 160 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AL139286.1-201ENST00000604465 483 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AL158050.2-201ENST00000605336 568 ntBASIC4.3□□□□□ -1.72
CSNK1G3Q9Y6M4 AP005229.2-201ENST00000609980 697 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms