Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 SNORA27.3-201ENST00000364937 134 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 RNU6-603P-201ENST00000411403 107 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 BTF3P9-201ENST00000418784 283 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 FAM204CP-201ENST00000424489 642 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC025181.1-201ENST00000477507 416 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 RPL31P61-201ENST00000496160 376 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC108157.1-201ENST00000510511 539 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC016550.3-201ENST00000515706 767 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 IGKV2-38-201ENST00000517443 247 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC105233.3-201ENST00000531125 744 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC007599.1-201ENST00000568688 1174 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 MIR3138-201ENST00000585238 82 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AF230666.2-201ENST00000602328 725 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 MIR6748-201ENST00000610433 71 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AL136295.6-201ENST00000610486 658 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AL118508.4-201ENST00000624142 1176 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AL049555.1-201ENST00000562834 1933 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 AC093311.1-201ENST00000506586 2021 ntBASIC3.77□□□□□ -1.81
TRAPPC4Q9Y296 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 MAPK10-373ENST00000641983 6772 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC114546.3-201ENST00000623582 1734 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 Z73965.1-201ENST00000623412 2297 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 MIR383-201ENST00000362257 73 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 RNU1-18P-201ENST00000363062 164 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 HMGN2P8-201ENST00000391458 268 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 OR6C69P-201ENST00000394268 893 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AL161909.1-201ENST00000397390 712 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC016712.1-201ENST00000431088 378 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC087650.1-201ENST00000431445 468 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC009263.1-201ENST00000441193 1239 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 BTBD7P2-201ENST00000441962 620 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AP002345.1-201ENST00000456493 928 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC105137.1-201ENST00000484355 562 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 CEACAMP10-202ENST00000495431 496 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC108475.1-201ENST00000507880 950 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC021146.7-201ENST00000509604 775 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC005798.1-201ENST00000513715 387 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AP003730.1-201ENST00000524605 285 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 HNRNPCP4-201ENST00000571636 900 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC006116.5-201ENST00000591936 559 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC244505.7-201ENST00000599675 272 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 MRPS35P3-201ENST00000603189 709 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC135803.1-201ENST00000608748 565 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC104307.1-201ENST00000616142 196 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 U7.8-201ENST00000619968 63 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AP006248.2-201ENST00000623309 592 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 LINC02471-203ENST00000641941 4752 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC009951.1-201ENST00000623674 2614 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 LINC00561-201ENST00000565815 2738 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 AC005261.4-201ENST00000600047 1385 ntBASIC3.76□□□□□ -1.81
TRAPPC4Q9Y296 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 OR11H5P-202ENST00000641612 1325 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 CCT8P1-201ENST00000413611 1657 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms