Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC090515.3-201ENST00000560431 315 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 ZNF971P-201ENST00000562068 1249 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 DPRXP4-201ENST00000578053 568 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 MIR3138-201ENST00000585238 82 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AP000484.1-201ENST00000620067 1252 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AL445363.3-201ENST00000623080 671 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AP003497.2-201ENST00000624220 967 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC140479.6-201ENST00000633535 357 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 MAPK10-303ENST00000641324 3959 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 A2MP1-204ENST00000566278 4130 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 RNU1-20P-201ENST00000363314 162 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC068538.1-201ENST00000376856 336 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 SNORA68.2-201ENST00000391263 128 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 RPL5P19-201ENST00000404228 893 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 MIR1911-201ENST00000410783 80 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 HIGD1AP15-201ENST00000416198 280 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 USP9YP21-201ENST00000420603 432 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 XKRYP1-201ENST00000423438 492 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC092648.1-201ENST00000425870 423 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 XKRYP2-201ENST00000432915 492 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC099063.2-201ENST00000446360 662 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 PSMC1P13-201ENST00000458195 985 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 SNORD11.1-201ENST00000459482 85 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 RPL23AP65-201ENST00000475608 468 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 DEFB109F-201ENST00000491870 277 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 RN7SL812P-201ENST00000493791 279 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 MTCYBP35-201ENST00000503630 1137 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC083829.1-201ENST00000503756 657 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 PSMB7P1-201ENST00000556349 514 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AP005262.1-201ENST00000582646 997 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 KPNA2P3-201ENST00000584190 848 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC022022.2-201ENST00000602989 360 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 Z82195.1-201ENST00000604558 398 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC005962.2-201ENST00000611427 652 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 MLECP1-201ENST00000615893 709 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AP004607.9-201ENST00000618202 316 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AC104985.3-201ENST00000623479 597 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AL158163.1-201ENST00000603915 1649 ntBASIC4.67□□□□□ -1.66
SIX4Q9UIU6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX4Q9UIU6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC017007.4-201ENST00000503353 1352 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AL592182.3-201ENST00000642132 3304 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 MFSD8-220ENST00000641243 1422 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 RNU6-906P-201ENST00000384700 70 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 RNU6-244P-201ENST00000391028 104 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 RN7SKP247-201ENST00000411094 308 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC011933.1-201ENST00000413334 321 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 MFSD13B-201ENST00000420133 1290 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AL157831.1-201ENST00000426134 473 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms