Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC023161.2-201ENST00000551218 780 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 MIR8058-201ENST00000615737 89 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 RNA5SP267-201ENST00000364893 126 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 HMGB3P20-201ENST00000417997 600 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 OR52Y1P-201ENST00000452418 828 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC090136.1-201ENST00000520009 240 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 ELOCP35-201ENST00000604289 336 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC015722.2-201ENST00000622210 551 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC120036.2-201ENST00000509729 1474 ntBASIC4.77□□□□□ -1.65
SCN11AQ9UI33 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 DDX18P6-201ENST00000450119 1997 ntBASIC4.77□□□□□ -1.65
SCN11AQ9UI33 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 RNA5SP424-201ENST00000390988 115 ntBASIC4.77□□□□□ -1.65
SCN11AQ9UI33 AC005300.1-201ENST00000428401 373 ntBASIC4.77□□□□□ -1.65
SCN11AQ9UI33 RN7SKP289-201ENST00000517244 295 ntBASIC4.77□□□□□ -1.65
SCN11AQ9UI33 AP005262.1-201ENST00000582646 997 ntBASIC4.77□□□□□ -1.65
SCN11AQ9UI33 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 LINC01109-201ENST00000603837 3081 ntBASIC4.77□□□□□ -1.65
SCN11AQ9UI33 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 AC093535.2-201ENST00000624769 2326 ntBASIC4.77□□□□□ -1.65
SCN11AQ9UI33 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN11AQ9UI33 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 RNVU1-14-201ENST00000384770 164 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 RPS29P4-201ENST00000414733 161 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 MIMT1-201ENST00000597105 1050 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 AL137843.1-201ENST00000605078 385 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 RNU4-35P-201ENST00000362588 141 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN11AQ9UI33 RPL23AP94-201ENST00000512518 302 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 SETP1-201ENST00000556014 845 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 AC233702.9-201ENST00000581528 203 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 AL031985.2-201ENST00000600955 480 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 AL353600.1-201ENST00000608148 251 ntBASIC4.76□□□□□ -1.65
SCN11AQ9UI33 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 RHOT1P2-201ENST00000366423 333 ntBASIC4.75□□□□□ -1.65
SCN11AQ9UI33 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 RN7SKP199-201ENST00000410325 305 ntBASIC4.75□□□□□ -1.65
SCN11AQ9UI33 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 BX510359.1-201ENST00000456973 237 ntBASIC4.75□□□□□ -1.65
SCN11AQ9UI33 UBE2DNL-203ENST00000474922 222 ntBASIC4.75□□□□□ -1.65
SCN11AQ9UI33 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms