Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC104454.1-201ENST00000421341 1401 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 OR8V1P-201ENST00000395193 873 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 RPS15AP40-201ENST00000419621 391 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 FABP7P2-201ENST00000429946 379 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 NDUFB4P8-201ENST00000435351 367 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AL008629.1-201ENST00000438615 184 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 RPS29P10-201ENST00000439197 166 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 Z77249.1-201ENST00000444622 1175 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 MTCO1P48-201ENST00000448024 1096 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC108161.1-201ENST00000461060 402 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 BX284632.1-201ENST00000478218 541 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 RPL7P18-201ENST00000478965 734 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 GAPDHP36-201ENST00000480688 918 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC013828.1-201ENST00000481845 158 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC022133.1-201ENST00000490961 571 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AP000676.2-201ENST00000529711 301 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 OR4A12P-201ENST00000530847 918 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 DPRXP4-201ENST00000578053 568 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AP005262.1-201ENST00000582646 997 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC104785.1-201ENST00000603220 588 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AP003485.2-201ENST00000623636 610 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC116618.1-201ENST00000634617 774 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC135068.12-201ENST00000637370 931 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC005539.1-201ENST00000443768 1479 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 U3.3-201ENST00000362986 216 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 RNU4-4P-201ENST00000364588 130 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 RSL24D1P4-201ENST00000400938 484 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC069218.2-201ENST00000411665 344 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AL133384.1-201ENST00000412744 351 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 RPL31P2-201ENST00000413849 377 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 PSMD10P3-201ENST00000437000 448 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AL359265.1-201ENST00000440296 795 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 MTND2P20-201ENST00000440805 661 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 RPL23AP16-201ENST00000441715 421 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms