Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AL121594.4-201ENST00000556211 1196 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AC141257.3-201ENST00000572906 215 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AC008507.2-201ENST00000588402 1176 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AC128687.2-201ENST00000609657 566 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AC245100.7-201ENST00000609678 442 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AL512427.1-201ENST00000618593 349 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 MIR6730-201ENST00000622213 67 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 USP9YP4-201ENST00000424401 1745 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 RPL23P2-201ENST00000320371 421 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 RN7SKP44-201ENST00000363602 316 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 RNU4-7P-201ENST00000364758 141 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 RNU6-1257P-201ENST00000384625 110 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 MIR1179-201ENST00000408703 91 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AP000357.1-201ENST00000409926 1165 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AMD1P2-201ENST00000412936 992 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 RPL23AP4-201ENST00000427757 463 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 MED6P1-201ENST00000439659 713 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 MTCYBP12-201ENST00000440559 1134 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 HMGB1P38-201ENST00000490557 577 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 GTF2IP9-201ENST00000502460 301 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 SUMO2P5-201ENST00000506790 245 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AC069306.1-201ENST00000507006 843 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AC010460.2-201ENST00000509054 677 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 SNORA31.13-201ENST00000516624 135 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 RNA5SP143-201ENST00000516936 115 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 NARSP2-201ENST00000518524 679 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 BGLT3-201ENST00000564523 994 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 MIR3176-201ENST00000582210 90 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 VN1R9P-201ENST00000614184 867 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AP004607.9-201ENST00000618202 316 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AC073342.3-201ENST00000624211 193 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AC126544.2-201ENST00000625174 749 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 FP325313.1-201ENST00000638228 703 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NDE1Q9NXR1 PNPT1P2-201ENST00000456768 2050 ntBASIC4.14□□□□□ -1.75
NDE1Q9NXR1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 BDP1P-201ENST00000582658 1990 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 MIR105-2-201ENST00000385083 81 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 MIR3065-201ENST00000390137 79 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AL355615.1-201ENST00000406187 641 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AC096533.1-201ENST00000411645 353 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 USP12PY-201ENST00000427677 1064 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 YWHAZP2-201ENST00000440317 728 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 TRY2P-201ENST00000448860 689 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AC239809.1-201ENST00000450470 217 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 RPS20P4-201ENST00000461659 355 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AC104164.2-201ENST00000496953 495 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms