Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 OR1AB1P-201ENST00000585564 761 ntBASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.34□□□□□ -1.71
TM9SF3Q9HD45 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC006042.3-201ENST00000454684 1469 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 RNA5SP52-201ENST00000362448 134 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 RHOT1P2-201ENST00000366423 333 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 GCNT6-201ENST00000379591 934 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 RNU6-452P-201ENST00000384406 107 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 MIR23B-201ENST00000384832 97 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 PPIAP31-201ENST00000405422 495 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 COX6CP15-201ENST00000426313 211 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AL353748.1-201ENST00000440753 474 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC114495.1-201ENST00000441274 436 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AL353093.1-201ENST00000441292 436 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC104306.1-201ENST00000449702 371 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 RPL21P71-201ENST00000465598 459 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC018635.1-201ENST00000468292 1030 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 FTH1P24-201ENST00000503502 462 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 RNA5SP49-201ENST00000516450 115 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 MED28P5-201ENST00000528254 438 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AGGF1P6-201ENST00000569213 976 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AP001180.3-201ENST00000582221 145 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC022916.3-201ENST00000592961 742 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC008638.3-201ENST00000603341 463 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC025175.1-201ENST00000606482 759 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 AC023509.5-201ENST00000617434 807 ntBASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF3Q9HD45 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AL122126.1-201ENST00000546905 1318 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 MIR372-201ENST00000362225 67 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 RNU1-85P-201ENST00000364127 164 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 RPS20P14-201ENST00000412545 360 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 MTND2P15-201ENST00000418575 892 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 MFSD13B-201ENST00000420133 1290 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 BTF3P10-201ENST00000433415 495 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 UBE2V1P3-201ENST00000439651 417 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AC090013.1-201ENST00000485147 480 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 RN7SL812P-201ENST00000493791 279 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 MTATP6P22-201ENST00000507369 598 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AC020593.1-201ENST00000507399 299 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 PPBPP1-201ENST00000510807 373 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 VWA8P1-201ENST00000510889 176 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AC008694.2-201ENST00000517591 306 ntBASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.32□□□□□ -1.72
TM9SF3Q9HD45 MIMT1-201ENST00000597105 1050 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms