Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL358176.3-201ENST00000420757 454 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 OR2AM1P-201ENST00000422137 422 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC234064.1-201ENST00000436312 247 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 KATNBL1P3-201ENST00000443475 909 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AL031584.1-201ENST00000447169 754 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 TPT1P13-201ENST00000449760 499 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 NPM1P39-201ENST00000449818 867 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AL935212.3-201ENST00000450729 284 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 MRPL42P4-201ENST00000453267 443 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC011979.1-201ENST00000472300 483 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC020890.1-201ENST00000491837 504 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 Y_RNA.719-201ENST00000517156 106 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC137768.1-201ENST00000549998 553 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 NBEAP1-201ENST00000554452 979 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 SULT1C2P2-201ENST00000562517 294 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 TVP23CP2-201ENST00000571473 623 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AP005136.1-201ENST00000579765 429 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 MIR4666A-201ENST00000580160 79 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 MIR4737-201ENST00000583979 81 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AP001542.2-201ENST00000593141 364 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC068790.7-201ENST00000602347 528 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 MEMO1P5-201ENST00000604810 406 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC090525.3-201ENST00000605601 189 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC139792.2-201ENST00000624218 587 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 CASC19-206ENST00000641028 1430 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 Z95327.2-201ENST00000414579 1873 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC027228.2-201ENST00000567141 2154 ntBASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.02□□□□□ -1.61
USP29Q9HBJ7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AL034370.1-201ENST00000397254 1590 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 NACA3P-201ENST00000359690 648 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 RNU6-1339P-201ENST00000363574 91 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 RNU6-707P-201ENST00000364647 95 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 RNVU1-6-201ENST00000364688 164 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 CYB5AP4-201ENST00000396692 399 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 RNU4-72P-201ENST00000410754 173 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 TBCAP2-201ENST00000416175 326 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 MTCO3P21-201ENST00000430791 643 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 MTND1P32-201ENST00000433043 938 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC092393.1-201ENST00000439625 742 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC104978.1-201ENST00000449387 391 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 RPL23AP56-201ENST00000460778 453 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 snoU109.6-201ENST00000516831 118 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC023632.1-201ENST00000518463 375 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 C1GALT1P3-201ENST00000522049 819 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC010306.1-201ENST00000523223 1117 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC044913.1-201ENST00000557200 430 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.01□□□□□ -1.61
USP29Q9HBJ7 EIF1P6-201ENST00000600054 334 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC234771.5-201ENST00000600161 514 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC146944.4-201ENST00000602697 718 ntBASIC5.01□□□□□ -1.61
USP29Q9HBJ7 AC011453.2-201ENST00000603737 729 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms