Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 COX6CP2-201ENST00000444980 225 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 BTF3P6-201ENST00000448054 499 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 KATNBL1P6-201ENST00000453433 915 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 DNAJB5P1-201ENST00000454004 806 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 RPS4XP12-201ENST00000461747 709 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC058823.1-201ENST00000485315 474 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 RPL7P41-201ENST00000485823 957 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC022133.1-201ENST00000490961 571 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 SETP14-201ENST00000497538 873 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC093281.2-201ENST00000510153 597 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 CDH12P4-201ENST00000517835 295 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 CDH12P3-201ENST00000517935 295 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 CDH12P1-201ENST00000518435 295 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AP002373.2-201ENST00000541631 1060 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC004217.3-201ENST00000551552 878 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC010546.1-201ENST00000569391 485 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 MIR3611-201ENST00000584484 83 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC022146.1-201ENST00000595307 847 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 VN1R92P-201ENST00000598511 928 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 U73023.1-201ENST00000603134 700 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC095055.1-201ENST00000603472 1113 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC107304.1-201ENST00000604229 296 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL390816.3-201ENST00000604527 1066 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL021997.1-201ENST00000605757 193 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 MIR6748-201ENST00000610433 71 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC005332.6-201ENST00000613178 446 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL359740.1-201ENST00000624340 592 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC015726.3-201ENST00000624501 418 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 STX3-208ENST00000641815 3236 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 Y_RNA.18-201ENST00000362461 102 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 RNU4-21P-201ENST00000362802 126 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 RNU5D-1-201ENST00000363299 116 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 MIR1286-201ENST00000408112 78 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 RPS25P9-201ENST00000435591 252 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC073850.1-201ENST00000449243 255 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AL672138.1-201ENST00000450604 1015 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 RPL23AP71-201ENST00000470966 469 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 RN7SL30P-201ENST00000488416 306 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 SCARNA16.4-201ENST00000516956 187 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 COX6B1P6-201ENST00000522347 255 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AP002963.1-201ENST00000530590 184 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC015720.2-201ENST00000567709 334 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC074051.3-201ENST00000570238 358 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC079089.3-201ENST00000603094 673 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC011626.1-201ENST00000604710 562 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AC091946.2-201ENST00000606105 291 ntBASIC4.92□□□□□ -1.62
AMBRA1Q9C0C7 AL451049.1-201ENST00000608672 497 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms