Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC005294.1-201ENST00000355509 281 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 RN7SKP162-201ENST00000363605 345 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 RNU6-619P-201ENST00000365146 108 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 SNORA26.8-201ENST00000391306 124 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC019050.1-201ENST00000418508 492 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC048351.1-201ENST00000420064 602 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC012075.1-201ENST00000436549 580 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AP000936.3-201ENST00000438127 255 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 GAPDHP25-201ENST00000447061 1001 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 HMGB1P4-201ENST00000455362 567 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 MTND1P16-201ENST00000465177 898 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 RPL23AP71-201ENST00000470966 469 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC104689.1-201ENST00000473356 768 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 RPL15P21-201ENST00000495592 567 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC112198.1-201ENST00000505369 1220 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC008638.1-201ENST00000506035 866 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 MTCO2P32-201ENST00000514865 403 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 Y_RNA.695-201ENST00000516715 107 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 SCARNA16.4-201ENST00000516956 187 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 IGKV2-36-201ENST00000519999 223 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC022880.1-201ENST00000534017 973 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 BLZF2P-201ENST00000553776 1130 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC027807.1-201ENST00000559921 996 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AGGF1P4-201ENST00000568249 801 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC011260.1-201ENST00000578420 472 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 WISP1-OT1-201ENST00000602893 642 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 SUMO2P15-201ENST00000604285 278 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC009027.1-201ENST00000604510 479 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC018714.1-201ENST00000605028 208 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC037198.3-201ENST00000616754 526 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC008443.7-201ENST00000622195 246 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC092656.1-203ENST00000624134 423 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AC090582.1-201ENST00000636321 199 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 AL392088.2-201ENST00000637607 285 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 KARSP3-201ENST00000571212 1504 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX18Q96RF0 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.8□□□□□ -1.64
SNX18Q96RF0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 OR5H15-201ENST00000383696 930 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 TMSB4XP8-201ENST00000402089 135 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 TMSB4XP6-201ENST00000415187 135 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC006366.1-201ENST00000422002 759 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 TMSB4XP1-201ENST00000424567 135 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC073069.1-201ENST00000428657 441 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms