Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RN7SL690P-201ENST00000582087 240 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AP003392.5-201ENST00000607857 415 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AC007497.1-201ENST00000610421 561 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 TUSC7.1-201ENST00000610969 165 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AL049794.2-201ENST00000616301 365 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AL359757.1-201ENST00000623176 255 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 CR381572.2-201ENST00000624852 397 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 USP9YP4-201ENST00000424401 1745 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 KARSP3-201ENST00000571212 1504 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HMGB4Q8WW32 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.9□□□□□ -1.62
HMGB4Q8WW32 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMGB4Q8WW32 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGB4Q8WW32 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.9□□□□□ -1.62
HMGB4Q8WW32 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
HMGB4Q8WW32 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGB4Q8WW32 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGB4Q8WW32 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.9□□□□□ -1.62
HMGB4Q8WW32 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 OR4K15-201ENST00000305051 1216 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 SNORD113-6-201ENST00000363345 75 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 RNU6-839P-201ENST00000363347 108 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 RNU6-560P-201ENST00000364007 108 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 Y_RNA.465-201ENST00000384293 102 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 RNU6-1151P-201ENST00000384684 107 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 U3.30-201ENST00000391308 210 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 ATP5F1P2-201ENST00000398143 760 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC009302.1-201ENST00000417147 390 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 FABP7P1-201ENST00000424004 391 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 Z93242.1-201ENST00000427102 353 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 FGF7P5-201ENST00000441829 291 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC002553.2-201ENST00000453217 340 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 NECAP1P2-201ENST00000455668 727 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC006511.1-201ENST00000470614 315 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 RN7SL809P-201ENST00000482040 297 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 VPS26AP1-201ENST00000483197 979 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 UBA52P3-201ENST00000491303 382 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AF279873.1-201ENST00000523393 313 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 ZNF321P-202ENST00000550843 495 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 MIR4277-201ENST00000578298 84 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 MIR4715-201ENST00000584117 79 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 MRPS35P3-201ENST00000603189 709 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC091488.1-201ENST00000604239 660 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AP003973.1-201ENST00000604639 691 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC116447.1-201ENST00000613153 453 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC023158.2-201ENST00000614876 543 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC105227.2-201ENST00000615075 605 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC108359.1-201ENST00000616451 1211 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC234782.5-201ENST00000617723 324 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC022509.4-201ENST00000621404 572 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC079416.3-201ENST00000624479 549 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 STX3-208ENST00000641815 3236 ntBASIC4.9□□□□□ -1.63
HMGB4Q8WW32 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB4Q8WW32 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 DHX40P1-201ENST00000588725 1412 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms