Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 HMGN1P11-201ENST00000508668 303 ntBASIC5.72□□□□□ -1.49
VPS8Q8N3P4 AP006245.1-201ENST00000522549 120 ntBASIC5.72□□□□□ -1.49
VPS8Q8N3P4 AL163642.2-201ENST00000604722 1019 ntBASIC5.72□□□□□ -1.49
VPS8Q8N3P4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VPS8Q8N3P4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VPS8Q8N3P4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VPS8Q8N3P4 AC009229.4-201ENST00000623854 1947 ntBASIC5.71□□□□□ -1.49
VPS8Q8N3P4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VPS8Q8N3P4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VPS8Q8N3P4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS8Q8N3P4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
VPS8Q8N3P4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
VPS8Q8N3P4 SNORD105B-201ENST00000458770 79 ntBASIC5.71□□□□□ -1.5
VPS8Q8N3P4 APOOP2-201ENST00000461561 539 ntBASIC5.71□□□□□ -1.5
VPS8Q8N3P4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS8Q8N3P4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS8Q8N3P4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS8Q8N3P4 DPRXP4-201ENST00000578053 568 ntBASIC5.71□□□□□ -1.5
VPS8Q8N3P4 AC008739.3-201ENST00000603262 127 ntBASIC5.71□□□□□ -1.5
VPS8Q8N3P4 AL732618.1-201ENST00000623251 301 ntBASIC5.71□□□□□ -1.5
VPS8Q8N3P4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS8Q8N3P4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VPS8Q8N3P4 SAGE2P-201ENST00000420011 2126 ntBASIC5.71□□□□□ -1.5
VPS8Q8N3P4 LINC00561-201ENST00000565815 2738 ntBASIC5.71□□□□□ -1.5
VPS8Q8N3P4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 SNORA63.1-201ENST00000362493 131 ntBASIC5.7□□□□□ -1.5
VPS8Q8N3P4 MTHFD2P2-201ENST00000407725 247 ntBASIC5.7□□□□□ -1.5
VPS8Q8N3P4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 RNU6-579P-201ENST00000516879 102 ntBASIC5.7□□□□□ -1.5
VPS8Q8N3P4 AC027281.1-201ENST00000574178 758 ntBASIC5.7□□□□□ -1.5
VPS8Q8N3P4 AC133552.5-201ENST00000604266 540 ntBASIC5.7□□□□□ -1.5
VPS8Q8N3P4 AC015967.1-201ENST00000619893 476 ntBASIC5.7□□□□□ -1.5
VPS8Q8N3P4 AC004777.1-201ENST00000624317 287 ntBASIC5.7□□□□□ -1.5
VPS8Q8N3P4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.7□□□□□ -1.5
VPS8Q8N3P4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VPS8Q8N3P4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 AL627171.1-201ENST00000618845 1308 ntBASIC5.69□□□□□ -1.5
VPS8Q8N3P4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 RPL21P23-201ENST00000446654 460 ntBASIC5.69□□□□□ -1.5
VPS8Q8N3P4 RBMY2UP-201ENST00000453474 324 ntBASIC5.69□□□□□ -1.5
VPS8Q8N3P4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS8Q8N3P4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 RN7SKP53-201ENST00000411337 315 ntBASIC5.68□□□□□ -1.5
VPS8Q8N3P4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 SOD1P3-201ENST00000518682 454 ntBASIC5.68□□□□□ -1.5
VPS8Q8N3P4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 HMGN2P47-201ENST00000559378 272 ntBASIC5.68□□□□□ -1.5
VPS8Q8N3P4 AC023389.2-201ENST00000580031 955 ntBASIC5.68□□□□□ -1.5
VPS8Q8N3P4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 AC233280.2-201ENST00000603917 1070 ntBASIC5.68□□□□□ -1.5
VPS8Q8N3P4 AC018690.1-201ENST00000608144 626 ntBASIC5.68□□□□□ -1.5
VPS8Q8N3P4 U6.105-201ENST00000637379 88 ntBASIC5.68□□□□□ -1.5
VPS8Q8N3P4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS8Q8N3P4 AC017007.4-201ENST00000503353 1352 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 RNA5SP42-201ENST00000364278 115 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 MIR183-201ENST00000384958 110 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS8Q8N3P4 AC096644.3-201ENST00000416788 338 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 AP000907.1-201ENST00000428428 510 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 HSPD1P21-201ENST00000436541 245 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 AC092641.1-201ENST00000440229 772 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VPS8Q8N3P4 RPL23AP71-201ENST00000470966 469 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS8Q8N3P4 HMGB3P13-201ENST00000511263 607 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS8Q8N3P4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS8Q8N3P4 AC243312.2-201ENST00000623340 601 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 AC067931.1-201ENST00000624190 671 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS8Q8N3P4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms