Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 VN1R7P-201ENST00000619242 903 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL157770.1-201ENST00000623049 439 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC109454.4-201ENST00000623411 649 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL353662.3-201ENST00000625131 237 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 SEC63P2-201ENST00000503863 1939 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 CASC19-284ENST00000642142 1868 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 NACA3P-201ENST00000359690 648 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 RNU6-543P-201ENST00000362576 108 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 MIR195-201ENST00000385194 87 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 SNORA40.2-201ENST00000390847 128 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AP000580.1-201ENST00000404439 358 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 RNA5SP498-201ENST00000411342 120 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 MTND4P22-201ENST00000413116 1169 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC005345.1-201ENST00000431868 217 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 GSTA7P-201ENST00000438425 448 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC007327.1-201ENST00000447461 264 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC010469.1-201ENST00000463864 576 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 RN7SL817P-201ENST00000480777 288 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 RPF2P2-201ENST00000504693 896 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AP005136.1-201ENST00000579765 429 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC133552.5-201ENST00000604266 540 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AL512624.1-201ENST00000613638 469 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AL392048.1-201ENST00000613946 534 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC007342.8-201ENST00000623278 678 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC007671.2-201ENST00000637344 619 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC103706.2-201ENST00000638080 240 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AC099654.2-201ENST00000433031 1980 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 AL606537.1-201ENST00000607258 2011 ntBASIC4.45□□□□□ -1.7
CLIP4Q8N3C7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC006042.3-201ENST00000454684 1469 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 HSPA8P17-201ENST00000427029 1382 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 C4BPAP1-201ENST00000415474 1893 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 ENSAP3-201ENST00000312710 333 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 MIR765-201ENST00000390226 114 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 RPL21P108-201ENST00000413857 481 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 TCEA1P4-201ENST00000415066 844 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 ATG4AP1-201ENST00000416893 538 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AL451139.1-201ENST00000434718 346 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 NMNAT1P2-201ENST00000435192 860 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms