Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT78Q8N1N4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT78Q8N1N4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
KRT78Q8N1N4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT78Q8N1N4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
KRT78Q8N1N4 AL390862.1-201ENST00000635467 1469 ntBASIC5.06□□□□□ -1.6
KRT78Q8N1N4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT78Q8N1N4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 OR5BR1P-201ENST00000524992 1330 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 RNU6-984P-201ENST00000363236 109 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 RNU5A-2P-201ENST00000384337 116 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 SNORD116-8-201ENST00000384365 95 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 MIR506-201ENST00000384998 124 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 U3.25-201ENST00000391209 220 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AL589647.1-201ENST00000402485 466 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AL023807.1-201ENST00000407932 359 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 SNORA11.3-201ENST00000408471 128 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AL138785.1-201ENST00000425821 331 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 COX6CP15-201ENST00000426313 211 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 RSL24D1P3-201ENST00000449255 495 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 MTCO3P11-201ENST00000455103 774 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 RN7SL101P-201ENST00000496350 279 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 RPS4XP20-201ENST00000505751 772 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 GTF2F2P1-201ENST00000511083 675 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 HNRNPKP5-201ENST00000515300 253 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 RNA5SP373-201ENST00000517271 95 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 NPM1P6-201ENST00000521088 871 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC106791.2-201ENST00000604680 391 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC005962.2-201ENST00000611427 652 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AL139418.1-201ENST00000613613 177 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC068722.2-201ENST00000618734 544 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 SNORA11.6-201ENST00000619030 128 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AP000676.3-201ENST00000623299 569 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC010608.2-201ENST00000624830 470 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC120349.2-201ENST00000625002 298 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 CYP4F35P-202ENST00000636121 390 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 AC135068.12-201ENST00000637370 931 ntBASIC5.05□□□□□ -1.6
KRT78Q8N1N4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
KRT78Q8N1N4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 ZNF542P-204ENST00000482727 1305 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 OR5H2-201ENST00000355273 945 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 RNU6-216P-201ENST00000363282 104 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 SSXP10-201ENST00000402595 565 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 MIR1284-201ENST00000408337 120 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 RN7SKP206-201ENST00000410823 293 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 AC068533.2-201ENST00000411872 306 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 NPM1P4-201ENST00000414095 812 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 AL022400.1-201ENST00000423946 935 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 SDCBPP2-201ENST00000424643 885 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 RPS29P10-201ENST00000439197 166 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 AL591503.2-201ENST00000442314 1005 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT78Q8N1N4 NOP56P2-201ENST00000447491 769 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 MTND2P19-201ENST00000449129 1012 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 RPL23AP35-201ENST00000451906 501 ntBASIC5.04□□□□□ -1.6
KRT78Q8N1N4 AC016724.1-201ENST00000453215 421 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms