Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 FAR2P4-202ENST00000425399 584 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RPL21P43-201ENST00000425440 472 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RPL7AP61-201ENST00000443410 636 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AL354714.3-201ENST00000447284 493 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 Z92846.1-201ENST00000456203 268 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RPS18P6-201ENST00000476880 458 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 UBA52P7-201ENST00000486088 380 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC005726.1-201ENST00000494679 427 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RN7SL558P-201ENST00000497468 299 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RNU6-467P-201ENST00000517027 110 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 IGKV2D-36-201ENST00000518643 226 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC010476.1-201ENST00000519111 851 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 IGLVIV-53-201ENST00000520107 367 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 OR4R3P-201ENST00000525084 838 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 CR383656.14-201ENST00000551951 406 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC006116.3-201ENST00000592968 361 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC005084.1-201ENST00000605160 304 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 BX649567.1-201ENST00000642071 1134 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AL391684.1-202ENST00000641293 1636 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 MTCO1P24-201ENST00000515438 1558 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 RNA5SP90-201ENST00000364801 99 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 RNU6-441P-201ENST00000384545 106 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC092638.1-201ENST00000411966 1275 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 CYP4F29P-201ENST00000420685 446 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC115285.1-201ENST00000424879 736 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC096632.1-201ENST00000427395 310 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC114973.1-201ENST00000429057 632 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 RPS27AP15-201ENST00000447672 466 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 HMGN2P21-201ENST00000447764 270 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 NDUFA5P7-201ENST00000452914 242 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 RN7SL443P-201ENST00000464331 290 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 RN7SL826P-201ENST00000479724 288 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 RPS4XP18-201ENST00000495480 763 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 NDUFB5P1-201ENST00000508134 564 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 STMN1P2-201ENST00000508435 439 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 RNU2-58P-201ENST00000516403 183 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 Y_RNA.719-201ENST00000517156 106 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 CDH12P4-201ENST00000517835 295 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 CDH12P3-201ENST00000517935 295 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 CDH12P1-201ENST00000518435 295 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 RN7SL176P-201ENST00000580352 264 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC087783.2-201ENST00000605070 562 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AP000943.4-201ENST00000622912 357 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC068880.4-201ENST00000623082 495 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC099494.2-201ENST00000623371 978 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 AC092747.4-201ENST00000620519 1861 ntBASIC4.23□□□□□ -1.73
C11orf88Q6PI97 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms