Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 Y_RNA.180-201ENST00000363867 113 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 RN7SKP69-201ENST00000365390 305 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 Y_RNA.350-201ENST00000365409 98 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 MIR548K-201ENST00000408406 116 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 TPMTP2-201ENST00000414372 726 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 MTND3P16-201ENST00000452205 344 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AC002553.2-201ENST00000453217 340 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AC079080.1-201ENST00000479841 822 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 RPS4XP23-201ENST00000487801 237 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 RN7SL187P-201ENST00000495587 303 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 TRIM77BP-201ENST00000524985 1119 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 MIR5095-201ENST00000578844 88 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 MIR5690-201ENST00000583739 73 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 AKAP17BP-201ENST00000431706 2719 ntBASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTC1Q2NKJ3 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC006020.1-201ENST00000420179 1854 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC011504.1-201ENST00000623331 4103 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC093297.3-201ENST00000607056 2517 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC119674.1-204ENST00000641348 1343 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC013488.1-201ENST00000526618 1838 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 COX6B1P3-201ENST00000312310 260 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 Y_RNA.100-201ENST00000363141 102 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 SNORA70.3-201ENST00000365075 132 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 Y_RNA.373-201ENST00000365600 103 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AL590762.1-201ENST00000391782 432 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 SOD2P1-201ENST00000396543 562 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 RPL31P52-201ENST00000407532 367 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 HMGN1P20-201ENST00000411849 300 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC013404.1-201ENST00000413068 249 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 RPL21P91-201ENST00000429231 479 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 RBMY2QP-201ENST00000429799 1147 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 RPL12P16-201ENST00000431098 498 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 ERLEC1P1-201ENST00000433806 578 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC092809.1-201ENST00000441469 474 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AL121871.1-201ENST00000443413 436 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 PRELID3BP1-201ENST00000457142 540 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC128716.1-201ENST00000475129 166 ntBASIC7.04□□□□□ -1.28
CTC1Q2NKJ3 AC013356.1-201ENST00000489027 564 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms