Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH1Q08174 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PCDH1Q08174 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 AC022031.1-201ENST00000585985 2593 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDH1Q08174 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDH1Q08174 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PCDH1Q08174 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 RNU6-984P-201ENST00000363236 109 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 RNU6-444P-201ENST00000383988 108 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 MIR191-201ENST00000384873 92 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 AL360271.1-201ENST00000395679 510 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 DHFRP6-201ENST00000401776 268 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 AC099535.1-201ENST00000408928 371 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 RN7SKP121-201ENST00000410842 305 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 RNU6-1068P-201ENST00000410958 103 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AL353777.1-201ENST00000425552 326 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 DNAJC19P5-201ENST00000443295 316 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 POU5F1P5-201ENST00000445059 658 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 RPL23AP15-201ENST00000450202 459 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 RANP2-201ENST00000456833 229 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 RPL7P15-201ENST00000461190 712 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AL035690.1-201ENST00000490892 383 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AC026427.2-201ENST00000506228 536 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 OR4D12P-201ENST00000509361 911 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 RNU6-277P-201ENST00000516272 106 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 IGLVIV-64-201ENST00000518581 301 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 PSMA3P-201ENST00000555485 635 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDH1Q08174 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AL121655.1-201ENST00000605811 308 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 uc_338.5-201ENST00000611839 155 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 RMST_7.1-201ENST00000621935 268 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 AC009161.2-201ENST00000624626 138 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 AC099654.6-201ENST00000636487 512 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 AL121768.1-201ENST00000613917 2544 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 RLIMP2-201ENST00000427891 1563 ntBASIC6.04□□□□□ -1.44
PCDH1Q08174 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH1Q08174 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
PCDH1Q08174 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDH1Q08174 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms