| PTPN11 | Q06124 | CASP1-215 | ENST00000533400 | 2001 nt | APPRIS P4 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | RNF6P1-201 | ENST00000444889 | 1784 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | SLC38A11-204 | ENST00000409662 | 1542 nt | APPRIS P2 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | CBX3P1-201 | ENST00000325243 | 554 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC005294.1-201 | ENST00000355509 | 281 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | Y_RNA.402-201 | ENST00000383972 | 102 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | TRAV8-7-201 | ENST00000390456 | 341 nt | APPRIS P1 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | MTCO3P1-205 | ENST00000422088 | 832 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AL356583.2-201 | ENST00000426536 | 280 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | HTR2A-AS1-201 | ENST00000430913 | 429 nt | TSL 3 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC006335.2-201 | ENST00000437993 | 330 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC034195.1-203 | ENST00000455703 | 728 nt | TSL 2 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | LINC01546-201 | ENST00000457435 | 674 nt | TSL 2 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AP000852.1-201 | ENST00000472460 | 573 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | RN7SL826P-201 | ENST00000479724 | 288 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | RPL7P6-201 | ENST00000480903 | 738 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | LINC01997-201 | ENST00000494900 | 429 nt | TSL 2 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | NDUFA5P12-201 | ENST00000503796 | 343 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC002460.1-201 | ENST00000504394 | 370 nt | TSL 3 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC093864.1-201 | ENST00000504555 | 745 nt | TSL 5 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC093689.1-203 | ENST00000505967 | 299 nt | TSL 3 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC108078.1-201 | ENST00000508073 | 725 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | STMN1P2-201 | ENST00000508435 | 439 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC016550.2-202 | ENST00000511940 | 581 nt | TSL 2 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AL358937.1-201 | ENST00000524512 | 336 nt | TSL 2 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | OR5AQ1P-201 | ENST00000527596 | 927 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC104383.1-201 | ENST00000530297 | 370 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC022878.1-201 | ENST00000530684 | 149 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | KLRC2-204 | ENST00000536833 | 771 nt | TSL 5 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | LINC02375-201 | ENST00000545739 | 852 nt | TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | LINC02293-201 | ENST00000548335 | 574 nt | TSL 5 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC009019.1-203 | ENST00000568603 | 515 nt | TSL 5 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC022884.3-201 | ENST00000579571 | 248 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC138035.1-202 | ENST00000604669 | 683 nt | TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC097717.1-249 | ENST00000608040 | 401 nt | TSL 5 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | ZNF75A-210 | ENST00000617839 | 1225 nt | APPRIS P1 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | DLEU1_2.1-201 | ENST00000617920 | 342 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | LINC00923-207 | ENST00000619015 | 505 nt | TSL 5 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC136475.10-201 | ENST00000620253 | 385 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | DARS-AS1-227 | ENST00000627442 | 633 nt | TSL 5 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | ANO4-202 | ENST00000392979 | 3909 nt | APPRIS P3 TSL 2 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | CHD8-202 | ENST00000430710 | 7420 nt | APPRIS P3 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | TMEM257-201 | ENST00000408967 | 2441 nt | APPRIS P1 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | ALKBH8-205 | ENST00000428149 | 4079 nt | APPRIS P3 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | CPED1-203 | ENST00000423795 | 2189 nt | TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | WDR63-202 | ENST00000326813 | 2888 nt | APPRIS ALT2 TSL 2 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | HMMR-202 | ENST00000358715 | 2988 nt | APPRIS P4 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC124017.1-201 | ENST00000508112 | 1594 nt | TSL 5 BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | EOGT-208 | ENST00000540764 | 1584 nt | APPRIS P1 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | LAMTOR3-202 | ENST00000499666 | 4226 nt | APPRIS P1 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | PLEKHA1-201 | ENST00000368988 | 3872 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | NLN-202 | ENST00000502464 | 8354 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | SMAP1-206 | ENST00000619054 | 3150 nt | TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | FPGT-208 | ENST00000534056 | 1426 nt | TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AHNAK2-201 | ENST00000333244 | 18254 nt | APPRIS P1 TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | MRC1-201 | ENST00000569591 | 5198 nt | APPRIS P1 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | OAZ3-204 | ENST00000479764 | 3789 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | BACH1-201 | ENST00000286800 | 5669 nt | APPRIS P1 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC117529.2-201 | ENST00000512159 | 2068 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC127164.1-201 | ENST00000548738 | 4196 nt | TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | GNG5P2-201 | ENST00000372054 | 207 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | C6orf62-201 | ENST00000378102 | 741 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | SNORA70.9-201 | ENST00000384370 | 135 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | snosnR66.1-201 | ENST00000391095 | 99 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | MTCO3P40-201 | ENST00000392516 | 676 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC005042.1-201 | ENST00000393397 | 800 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AL133270.1-201 | ENST00000402635 | 279 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AL136131.1-201 | ENST00000406079 | 803 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | CCNG1P1-201 | ENST00000406783 | 885 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC073264.1-201 | ENST00000411508 | 416 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | MTND4LP17-201 | ENST00000414607 | 293 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC009158.1-206 | ENST00000417476 | 454 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AL136369.2-201 | ENST00000420825 | 537 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AL445123.1-201 | ENST00000422023 | 446 nt | TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | TXNDC8-204 | ENST00000423740 | 356 nt | TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC017002.2-201 | ENST00000426124 | 792 nt | TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | LINC02257-202 | ENST00000433576 | 720 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | ENOX1-AS2-201 | ENST00000434273 | 609 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC012368.1-201 | ENST00000438115 | 552 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | YWHAQP9-201 | ENST00000445891 | 512 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | OFD1P4Y-201 | ENST00000455273 | 1179 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AMD1P1-201 | ENST00000457220 | 922 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC004129.2-201 | ENST00000457229 | 287 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC008953.1-201 | ENST00000497334 | 318 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC116616.1-201 | ENST00000508815 | 366 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | NDUFB4P2-201 | ENST00000509515 | 391 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AF117829.1-203 | ENST00000520306 | 421 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | OR5M7P-201 | ENST00000526140 | 972 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC073172.2-201 | ENST00000527770 | 571 nt | TSL 4 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC090424.1-201 | ENST00000535243 | 736 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC008083.3-201 | ENST00000547777 | 329 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | CYCSP2-201 | ENST00000558168 | 301 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC113418.1-201 | ENST00000569928 | 517 nt | TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC022211.1-201 | ENST00000579554 | 717 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | LINC00343-210 | ENST00000608220 | 806 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC092954.2-201 | ENST00000609103 | 430 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AL590282.1-201 | ENST00000610379 | 1136 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC008250.2-201 | ENST00000615261 | 205 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | Y_RNA.804-201 | ENST00000615262 | 101 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| PTPN11 | Q06124 | AC007742.2-201 | ENST00000618226 | 398 nt | BASIC | 6.26 | □□□□□ -1.41 | | |