Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGCS1Q01581 MRPL49P2-201ENST00000521066 465 ntBASIC3.85□□□□□ -1.79
HMGCS1Q01581 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGCS1Q01581 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGCS1Q01581 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HMGCS1Q01581 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGCS1Q01581 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGCS1Q01581 AC084757.1-201ENST00000559987 490 ntBASIC3.85□□□□□ -1.79
HMGCS1Q01581 AC020658.4-201ENST00000613987 684 ntBASIC3.85□□□□□ -1.79
HMGCS1Q01581 AL133370.2-201ENST00000619934 439 ntBASIC3.85□□□□□ -1.79
HMGCS1Q01581 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS1Q01581 AC124312.6-202ENST00000623624 418 ntBASIC3.85□□□□□ -1.79
HMGCS1Q01581 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HMGCS1Q01581 OR52H1-202ENST00000641796 1061 ntBASIC3.85□□□□□ -1.79
HMGCS1Q01581 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HMGCS1Q01581 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS1Q01581 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS1Q01581 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS1Q01581 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS1Q01581 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGCS1Q01581 PNPT1P2-201ENST00000456768 2050 ntBASIC3.85□□□□□ -1.79
HMGCS1Q01581 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS1Q01581 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS1Q01581 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS1Q01581 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS1Q01581 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS1Q01581 RN7SKP33-201ENST00000410942 340 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 MTND2P11-201ENST00000423638 648 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS1Q01581 YY1P1-201ENST00000427625 668 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 RPS6P12-201ENST00000432491 726 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AL157884.3-201ENST00000448273 1184 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC010627.1-201ENST00000503819 1294 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 SNORA31.9-201ENST00000516429 84 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC067904.2-201ENST00000517322 1283 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 SMARCE1P4-201ENST00000523647 241 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 PARP1P2-201ENST00000556806 195 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 RN7SL600P-201ENST00000581811 299 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC110743.1-201ENST00000584870 478 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 AC245128.3-201ENST00000594721 748 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 PSMA6P4-201ENST00000603247 718 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 HMGB1P51-201ENST00000605166 638 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 MIR6868-201ENST00000611215 58 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 MIR4727-201ENST00000622232 55 ntBASIC3.84□□□□□ -1.79
HMGCS1Q01581 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS1Q01581 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS1Q01581 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.84□□□□□ -1.79
HMGCS1Q01581 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMGCS1Q01581 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMGCS1Q01581 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMGCS1Q01581 USP9YP4-201ENST00000424401 1745 ntBASIC3.84□□□□□ -1.8
HMGCS1Q01581 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
HMGCS1Q01581 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.84□□□□□ -1.8
HMGCS1Q01581 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMGCS1Q01581 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMGCS1Q01581 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGCS1Q01581 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 RNA5SP502-201ENST00000362694 119 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 RNU6-1251P-201ENST00000364502 107 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGCS1Q01581 HMGB3P19-201ENST00000403971 560 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 RN7SKP222-201ENST00000410651 315 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 TPT1P2-201ENST00000413105 503 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 AL450992.3-201ENST00000413192 568 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC048351.1-201ENST00000420064 602 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 COX6CP15-201ENST00000426313 211 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 DPY19L1P2-201ENST00000426647 915 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 RSL24D1P6-201ENST00000426934 401 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 KCTD9P3-201ENST00000434597 1169 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms