Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL645927.2-201ENST00000618350 349 ntBASIC3.49□□□□□ -1.85
HIST1H3AP68431 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.49□□□□□ -1.85
HIST1H3AP68431 OR5BE1P-202ENST00000641168 1176 ntBASIC3.49□□□□□ -1.85
HIST1H3AP68431 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HIST1H3AP68431 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H3AP68431 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.49□□□□□ -1.85
HIST1H3AP68431 MTND4P10-201ENST00000446199 1363 ntBASIC3.49□□□□□ -1.85
HIST1H3AP68431 AC008725.1-201ENST00000605123 2263 ntBASIC3.49□□□□□ -1.85
HIST1H3AP68431 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H3AP68431 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H3AP68431 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H3AP68431 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H3AP68431 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H3AP68431 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H3AP68431 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 RNA5SP399-201ENST00000364003 117 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 MIR1183-201ENST00000408856 89 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC016769.2-201ENST00000414815 475 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AL356095.1-201ENST00000417217 199 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 RPL7P53-201ENST00000421245 739 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 OR6K4P-201ENST00000423179 955 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC016712.1-201ENST00000431088 378 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 RPS11P1-201ENST00000451072 473 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC092045.1-201ENST00000495716 1231 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 MRPL49P2-201ENST00000521066 465 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 VN1R79P-201ENST00000593540 513 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 AL023583.1-201ENST00000607518 1143 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC019131.2-201ENST00000609071 870 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 MIR6716-201ENST00000613413 80 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC145207.9-201ENST00000623802 325 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC090506.2-201ENST00000624521 419 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H3AP68431 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H3AP68431 CASC19-261ENST00000641853 1638 ntBASIC3.48□□□□□ -1.85
HIST1H3AP68431 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H3AP68431 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H3AP68431 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H3AP68431 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H3AP68431 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 MTCO1P14-201ENST00000441695 1559 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC022893.2-201ENST00000564832 3296 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 MAPK10-373ENST00000641983 6772 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 RNA5SP130-201ENST00000364431 114 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 RPL7AP73-201ENST00000413490 353 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 TRGV7-201ENST00000427089 353 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 HIGD1AP4-201ENST00000430194 280 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC087650.1-201ENST00000431445 468 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AL356535.1-201ENST00000440335 398 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 RPL21P71-201ENST00000465598 459 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 AL132838.2-201ENST00000492041 314 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 NIPA2P2-201ENST00000496376 1083 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC138701.1-201ENST00000524329 714 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC069366.1-201ENST00000583159 838 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC083899.3-201ENST00000603413 594 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H3AP68431 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 AC090229.1-201ENST00000590983 1609 ntBASIC3.47□□□□□ -1.85
HIST1H3AP68431 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H3AP68431 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H3AP68431 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
HIST1H3AP68431 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.46□□□□□ -1.86
HIST1H3AP68431 AL136964.1-201ENST00000622038 2990 ntBASIC3.46□□□□□ -1.86
HIST1H3AP68431 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms