Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AP003730.1-201ENST00000524605 285 ntBASIC3.58□□□□□ -1.84
LSM6P62312 AC025627.2-201ENST00000576220 160 ntBASIC3.58□□□□□ -1.84
LSM6P62312 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.58□□□□□ -1.84
LSM6P62312 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LSM6P62312 AC068020.1-201ENST00000594215 661 ntBASIC3.58□□□□□ -1.84
LSM6P62312 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LSM6P62312 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.58□□□□□ -1.84
LSM6P62312 AC010608.2-201ENST00000624830 470 ntBASIC3.58□□□□□ -1.84
LSM6P62312 AL773545.4-201ENST00000637262 310 ntBASIC3.58□□□□□ -1.84
LSM6P62312 AL513478.4-201ENST00000641636 310 ntBASIC3.58□□□□□ -1.84
LSM6P62312 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSM6P62312 DCAF13P3-201ENST00000561147 1334 ntBASIC3.58□□□□□ -1.84
LSM6P62312 AC005261.4-201ENST00000600047 1385 ntBASIC3.58□□□□□ -1.84
LSM6P62312 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSM6P62312 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LSM6P62312 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LSM6P62312 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
LSM6P62312 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM6P62312 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
LSM6P62312 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LSM6P62312 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LSM6P62312 RNU1-89P-201ENST00000384592 164 ntBASIC3.57□□□□□ -1.84
LSM6P62312 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LSM6P62312 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LSM6P62312 RN7SKP33-201ENST00000410942 340 ntBASIC3.57□□□□□ -1.84
LSM6P62312 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM6P62312 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM6P62312 PTP4A1P5-201ENST00000420305 455 ntBASIC3.57□□□□□ -1.84
LSM6P62312 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM6P62312 COX6CP15-201ENST00000426313 211 ntBASIC3.57□□□□□ -1.84
LSM6P62312 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM6P62312 RPS26P40-201ENST00000435209 294 ntBASIC3.57□□□□□ -1.84
LSM6P62312 ZNF962P-201ENST00000443465 3140 ntBASIC3.57□□□□□ -1.84
LSM6P62312 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM6P62312 TPT1P13-201ENST00000449760 499 ntBASIC3.57□□□□□ -1.84
LSM6P62312 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.57□□□□□ -1.84
LSM6P62312 FCF1P7-201ENST00000451185 558 ntBASIC3.57□□□□□ -1.84
LSM6P62312 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM6P62312 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM6P62312 AC023050.1-201ENST00000498198 304 ntBASIC3.57□□□□□ -1.84
LSM6P62312 HPRT1P2-201ENST00000505250 544 ntBASIC3.57□□□□□ -1.84
LSM6P62312 SNX5P1-201ENST00000505757 1041 ntBASIC3.57□□□□□ -1.84
LSM6P62312 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM6P62312 KRT19P6-201ENST00000510983 209 ntBASIC3.57□□□□□ -1.84
LSM6P62312 SNORA70.14-201ENST00000516205 110 ntBASIC3.57□□□□□ -1.84
LSM6P62312 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM6P62312 OR7E10P-201ENST00000526420 991 ntBASIC3.57□□□□□ -1.84
LSM6P62312 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM6P62312 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.57□□□□□ -1.84
LSM6P62312 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM6P62312 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM6P62312 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.57□□□□□ -1.84
LSM6P62312 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM6P62312 AGGF1P8-201ENST00000562979 1000 ntBASIC3.57□□□□□ -1.84
LSM6P62312 MIR3138-201ENST00000585238 82 ntBASIC3.57□□□□□ -1.84
LSM6P62312 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM6P62312 AL049634.3-201ENST00000604968 457 ntBASIC3.57□□□□□ -1.84
LSM6P62312 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LSM6P62312 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM6P62312 AC016957.2-201ENST00000616998 848 ntBASIC3.57□□□□□ -1.84
LSM6P62312 AC095038.2-201ENST00000621464 1070 ntBASIC3.57□□□□□ -1.84
LSM6P62312 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM6P62312 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM6P62312 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LSM6P62312 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LSM6P62312 SPATA2P1-201ENST00000431223 2055 ntBASIC3.56□□□□□ -1.84
LSM6P62312 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LSM6P62312 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LSM6P62312 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LSM6P62312 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LSM6P62312 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LSM6P62312 OR11H4-201ENST00000315409 1082 ntBASIC3.56□□□□□ -1.84
LSM6P62312 ENSAP1-201ENST00000392855 326 ntBASIC3.56□□□□□ -1.84
LSM6P62312 OR6C69P-201ENST00000394268 893 ntBASIC3.56□□□□□ -1.84
LSM6P62312 HMGB3P19-201ENST00000403971 560 ntBASIC3.56□□□□□ -1.84
LSM6P62312 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LSM6P62312 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM6P62312 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.56□□□□□ -1.84
LSM6P62312 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.56□□□□□ -1.84
LSM6P62312 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM6P62312 AC011742.1-201ENST00000431448 434 ntBASIC3.56□□□□□ -1.84
LSM6P62312 ATP5HP2-201ENST00000433885 485 ntBASIC3.56□□□□□ -1.84
LSM6P62312 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LSM6P62312 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM6P62312 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.56□□□□□ -1.84
LSM6P62312 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LSM6P62312 EXTL2P1-201ENST00000446218 416 ntBASIC3.56□□□□□ -1.84
LSM6P62312 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM6P62312 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.56□□□□□ -1.84
LSM6P62312 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM6P62312 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM6P62312 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM6P62312 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
LSM6P62312 RPL31P61-201ENST00000496160 376 ntBASIC3.56□□□□□ -1.84
LSM6P62312 USP9YP5-201ENST00000511770 630 ntBASIC3.56□□□□□ -1.84
LSM6P62312 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.56□□□□□ -1.84
LSM6P62312 C1GALT1P3-201ENST00000522049 819 ntBASIC3.56□□□□□ -1.84
LSM6P62312 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM6P62312 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.56□□□□□ -1.84
LSM6P62312 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms