Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.9□□□□□ -1.79
VSX2P58304 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.9□□□□□ -1.79
VSX2P58304 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.9□□□□□ -1.79
VSX2P58304 AC087888.1-201ENST00000550884 1254 ntBASIC3.9□□□□□ -1.79
VSX2P58304 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.9□□□□□ -1.79
VSX2P58304 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.9□□□□□ -1.79
VSX2P58304 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.9□□□□□ -1.79
VSX2P58304 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.9□□□□□ -1.79
VSX2P58304 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.9□□□□□ -1.79
VSX2P58304 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.9□□□□□ -1.79
VSX2P58304 AC024941.1-201ENST00000612250 334 ntBASIC3.9□□□□□ -1.79
VSX2P58304 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.9□□□□□ -1.79
VSX2P58304 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.9□□□□□ -1.79
VSX2P58304 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
VSX2P58304 ZNF962P-201ENST00000443465 3140 ntBASIC3.9□□□□□ -1.79
VSX2P58304 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VSX2P58304 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.89□□□□□ -1.79
VSX2P58304 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
VSX2P58304 AC007342.9-201ENST00000623877 1385 ntBASIC3.89□□□□□ -1.79
VSX2P58304 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
VSX2P58304 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.89□□□□□ -1.79
VSX2P58304 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VSX2P58304 DHFRP5-201ENST00000406944 564 ntBASIC3.89□□□□□ -1.79
VSX2P58304 RNU4-6P-201ENST00000410804 122 ntBASIC3.89□□□□□ -1.79
VSX2P58304 PGBD4P8-201ENST00000412993 562 ntBASIC3.89□□□□□ -1.79
VSX2P58304 AL450992.3-201ENST00000413192 568 ntBASIC3.89□□□□□ -1.79
VSX2P58304 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.89□□□□□ -1.79
VSX2P58304 AC115285.1-201ENST00000424879 736 ntBASIC3.89□□□□□ -1.79
VSX2P58304 DPY19L1P2-201ENST00000426647 915 ntBASIC3.89□□□□□ -1.79
VSX2P58304 YWHAEP5-201ENST00000431545 765 ntBASIC3.89□□□□□ -1.79
VSX2P58304 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.89□□□□□ -1.79
VSX2P58304 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.89□□□□□ -1.79
VSX2P58304 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.89□□□□□ -1.79
VSX2P58304 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.89□□□□□ -1.79
VSX2P58304 RPS26P15-201ENST00000488067 348 ntBASIC3.89□□□□□ -1.79
VSX2P58304 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.89□□□□□ -1.79
VSX2P58304 RNU7-143P-201ENST00000516781 65 ntBASIC3.89□□□□□ -1.79
VSX2P58304 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.89□□□□□ -1.79
VSX2P58304 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.89□□□□□ -1.79
VSX2P58304 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VSX2P58304 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.89□□□□□ -1.79
VSX2P58304 VN1R85P-201ENST00000601587 426 ntBASIC3.89□□□□□ -1.79
VSX2P58304 MIR432-201ENST00000606207 94 ntBASIC3.89□□□□□ -1.79
VSX2P58304 AP005264.7-201ENST00000625003 745 ntBASIC3.89□□□□□ -1.79
VSX2P58304 AC134882.1-201ENST00000603738 1676 ntBASIC3.89□□□□□ -1.79
VSX2P58304 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VSX2P58304 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VSX2P58304 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
VSX2P58304 AC110792.3-201ENST00000595906 1614 ntBASIC3.88□□□□□ -1.79
VSX2P58304 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.88□□□□□ -1.79
VSX2P58304 CASC19-261ENST00000641853 1638 ntBASIC3.88□□□□□ -1.79
VSX2P58304 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
VSX2P58304 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.88□□□□□ -1.79
VSX2P58304 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
VSX2P58304 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.88□□□□□ -1.79
VSX2P58304 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.88□□□□□ -1.79
VSX2P58304 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.88□□□□□ -1.79
VSX2P58304 MTND2P11-201ENST00000423638 648 ntBASIC3.88□□□□□ -1.79
VSX2P58304 CASP3P1-201ENST00000446037 609 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.88□□□□□ -1.79
VSX2P58304 RPL5P32-201ENST00000454085 879 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AC092691.2-201ENST00000461787 803 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.88□□□□□ -1.79
VSX2P58304 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.88□□□□□ -1.79
VSX2P58304 ATG10-AS1-201ENST00000504846 648 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AC026402.1-201ENST00000513642 170 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.88□□□□□ -1.79
VSX2P58304 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.88□□□□□ -1.79
VSX2P58304 NPM1P35-201ENST00000533043 868 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.88□□□□□ -1.79
VSX2P58304 OR8R1P-201ENST00000543943 764 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.88□□□□□ -1.79
VSX2P58304 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.88□□□□□ -1.79
VSX2P58304 AC110743.1-201ENST00000584870 478 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.88□□□□□ -1.79
VSX2P58304 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.88□□□□□ -1.79
VSX2P58304 BMS1P7-201ENST00000602440 1052 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AC114878.2-201ENST00000604863 1251 ntBASIC3.88□□□□□ -1.79
VSX2P58304 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.88□□□□□ -1.79
VSX2P58304 MIR4727-201ENST00000622232 55 ntBASIC3.88□□□□□ -1.79
VSX2P58304 PHKBP1-201ENST00000450951 1951 ntBASIC3.88□□□□□ -1.79
VSX2P58304 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VSX2P58304 AC105074.1-201ENST00000623380 3095 ntBASIC3.88□□□□□ -1.79
VSX2P58304 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VSX2P58304 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.88□□□□□ -1.79
VSX2P58304 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VSX2P58304 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VSX2P58304 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VSX2P58304 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VSX2P58304 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VSX2P58304 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VSX2P58304 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.87□□□□□ -1.79
VSX2P58304 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VSX2P58304 AC018555.1-201ENST00000567548 1980 ntBASIC3.87□□□□□ -1.79
VSX2P58304 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VSX2P58304 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VSX2P58304 AL445437.1-201ENST00000623157 3087 ntBASIC3.87□□□□□ -1.79
VSX2P58304 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.87□□□□□ -1.79
VSX2P58304 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.87□□□□□ -1.79
VSX2P58304 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 251.8 ms