Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AL138820.1-201ENST00000617901 5305 ntBASIC4.45□□□□□ -1.7
FOXG1P55316 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXG1P55316 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXG1P55316 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXG1P55316 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 RN7SKP95-201ENST00000362860 303 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXG1P55316 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXG1P55316 RNU6-1200P-201ENST00000384162 107 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 SNORA66-201ENST00000384792 133 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 HMGB1P10-201ENST00000395823 563 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 SNORA11B-201ENST00000408175 129 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 MTCYBP38-201ENST00000417160 1123 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 Z75741.2-201ENST00000417272 1167 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 HSPE1P16-201ENST00000426640 348 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXG1P55316 MTND3P23-201ENST00000431980 347 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 HMGB3P10-201ENST00000434734 572 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXG1P55316 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXG1P55316 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXG1P55316 AP000542.1-201ENST00000448473 371 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 GAPDHP14-201ENST00000450472 937 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 AC002553.2-201ENST00000453217 340 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXG1P55316 SETP11-201ENST00000473027 690 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
FOXG1P55316 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 AC112198.1-201ENST00000505369 1220 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 MRPS33P2-201ENST00000507850 322 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXG1P55316 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 RFPL4AP5-201ENST00000514977 504 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 AC100784.1-201ENST00000522790 310 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXG1P55316 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.44□□□□□ -1.7
FOXG1P55316 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXG1P55316 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 ISCA1P3-201ENST00000577104 373 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXG1P55316 MIR4436B2-201ENST00000581415 91 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 MIR4436B1-201ENST00000583272 91 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 OR4G1P-201ENST00000588632 938 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 AP002884.5-201ENST00000595053 1132 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 MTCO2P22-201ENST00000603246 681 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 AC010857.1-201ENST00000606398 594 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXG1P55316 AC104985.2-201ENST00000620598 500 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 AC008443.7-201ENST00000622195 246 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXG1P55316 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 SEPT14P19-203ENST00000633205 211 ntBASIC4.44□□□□□ -1.7
FOXG1P55316 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
FOXG1P55316 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXG1P55316 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
FOXG1P55316 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXG1P55316 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXG1P55316 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXG1P55316 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
FOXG1P55316 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXG1P55316 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXG1P55316 CASC19-221ENST00000641309 1382 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXG1P55316 IRF5P1-201ENST00000504852 2164 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 AC027228.2-201ENST00000567141 2154 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXG1P55316 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXG1P55316 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
FOXG1P55316 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXG1P55316 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
FOXG1P55316 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXG1P55316 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXG1P55316 RNU4-44P-201ENST00000363050 141 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 RNU1-87P-201ENST00000363727 170 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 Y_RNA.192-201ENST00000363977 102 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 RNU6-761P-201ENST00000384148 107 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 SNORA51.8-201ENST00000384234 132 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 SNORA70.10-201ENST00000384515 134 ntBASIC4.43□□□□□ -1.7
FOXG1P55316 AC136624.1-201ENST00000400791 413 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms