Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNA5SP443-201ENST00000363083 132 ntBASIC4.2□□□□□ -1.74
CDH6P55285 SNORA62-201ENST00000365493 153 ntBASIC4.2□□□□□ -1.74
CDH6P55285 RNA5SP498-201ENST00000411342 120 ntBASIC4.2□□□□□ -1.74
CDH6P55285 HSPE1P12-201ENST00000412576 301 ntBASIC4.2□□□□□ -1.74
CDH6P55285 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH6P55285 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH6P55285 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH6P55285 OR5BE1P-201ENST00000425977 939 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC073069.1-201ENST00000428657 441 ntBASIC4.2□□□□□ -1.74
CDH6P55285 NANOGP6-201ENST00000429190 847 ntBASIC4.2□□□□□ -1.74
CDH6P55285 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH6P55285 MTCYBP12-201ENST00000440559 1134 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH6P55285 TPTE2P3-201ENST00000441562 1189 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH6P55285 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH6P55285 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH6P55285 AC092691.2-201ENST00000461787 803 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH6P55285 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH6P55285 RN7SKP122-201ENST00000515923 296 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH6P55285 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH6P55285 GNRHR2P1-201ENST00000555315 631 ntBASIC4.2□□□□□ -1.74
CDH6P55285 NPM1P47-201ENST00000560843 856 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC009268.1-201ENST00000561352 1203 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH6P55285 AC022968.1-201ENST00000567372 442 ntBASIC4.2□□□□□ -1.74
CDH6P55285 MIR4716-201ENST00000579628 84 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC110743.1-201ENST00000584870 478 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH6P55285 AL139395.1-201ENST00000603662 160 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC128687.2-201ENST00000609657 566 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH6P55285 RMST_9.1-201ENST00000619945 193 ntBASIC4.2□□□□□ -1.74
CDH6P55285 MIR6758-201ENST00000620653 63 ntBASIC4.2□□□□□ -1.74
CDH6P55285 AC010608.2-201ENST00000624830 470 ntBASIC4.2□□□□□ -1.74
CDH6P55285 MIR6830-201ENST00000636015 70 ntBASIC4.2□□□□□ -1.74
CDH6P55285 OR5BE1P-202ENST00000641168 1176 ntBASIC4.2□□□□□ -1.74
CDH6P55285 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH6P55285 AC068254.2-201ENST00000623938 3577 ntBASIC4.2□□□□□ -1.74
CDH6P55285 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.2□□□□□ -1.74
CDH6P55285 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH6P55285 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH6P55285 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CDH6P55285 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH6P55285 RPL32P3-201ENST00000359025 275 ntBASIC4.19□□□□□ -1.74
CDH6P55285 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDH6P55285 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH6P55285 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH6P55285 Y_RNA.625-201ENST00000411256 107 ntBASIC4.19□□□□□ -1.74
CDH6P55285 MRPL50P1-201ENST00000431951 384 ntBASIC4.19□□□□□ -1.74
CDH6P55285 GSTA7P-201ENST00000438425 448 ntBASIC4.19□□□□□ -1.74
CDH6P55285 RAD1P2-201ENST00000446414 663 ntBASIC4.19□□□□□ -1.74
CDH6P55285 AC239809.1-201ENST00000450470 217 ntBASIC4.19□□□□□ -1.74
CDH6P55285 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDH6P55285 RN7SL271P-201ENST00000487601 295 ntBASIC4.19□□□□□ -1.74
CDH6P55285 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH6P55285 AC139783.2-201ENST00000504847 1145 ntBASIC4.19□□□□□ -1.74
CDH6P55285 SNORD116-26-201ENST00000516006 96 ntBASIC4.19□□□□□ -1.74
CDH6P55285 SNORA31.9-201ENST00000516429 84 ntBASIC4.19□□□□□ -1.74
CDH6P55285 AC008083.2-201ENST00000546707 476 ntBASIC4.19□□□□□ -1.74
CDH6P55285 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH6P55285 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH6P55285 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH6P55285 RN7SL600P-201ENST00000581811 299 ntBASIC4.19□□□□□ -1.74
CDH6P55285 AC069366.1-201ENST00000583159 838 ntBASIC4.19□□□□□ -1.74
CDH6P55285 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH6P55285 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH6P55285 AC025946.2-201ENST00000603398 234 ntBASIC4.19□□□□□ -1.74
CDH6P55285 MIR378J-201ENST00000611988 109 ntBASIC4.19□□□□□ -1.74
CDH6P55285 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH6P55285 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH6P55285 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH6P55285 AC000123.2-201ENST00000623124 461 ntBASIC4.19□□□□□ -1.74
CDH6P55285 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
CDH6P55285 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH6P55285 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CDH6P55285 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH6P55285 LINC02471-203ENST00000641941 4752 ntBASIC4.18□□□□□ -1.74
CDH6P55285 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH6P55285 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH6P55285 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH6P55285 ENSAP1-201ENST00000392855 326 ntBASIC4.18□□□□□ -1.74
CDH6P55285 MIR1251-201ENST00000408552 70 ntBASIC4.18□□□□□ -1.74
CDH6P55285 RNA5SP239-201ENST00000410218 129 ntBASIC4.18□□□□□ -1.74
CDH6P55285 TPT1P2-201ENST00000413105 503 ntBASIC4.18□□□□□ -1.74
CDH6P55285 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 RAC1P3-201ENST00000416129 580 ntBASIC4.18□□□□□ -1.74
CDH6P55285 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH6P55285 AC234779.1-201ENST00000425910 285 ntBASIC4.18□□□□□ -1.74
CDH6P55285 C4BPAP2-201ENST00000428434 478 ntBASIC4.18□□□□□ -1.74
CDH6P55285 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH6P55285 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH6P55285 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH6P55285 Z99127.2-201ENST00000441426 334 ntBASIC4.18□□□□□ -1.74
CDH6P55285 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms