Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC091516.1-201ENST00000549191 703 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AL136520.1-202ENST00000555494 763 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.68□□□□□ -1.66
NEDD4P46934 AL592436.1-201ENST00000605135 558 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AC012557.1-201ENST00000607115 611 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AL355802.4-201ENST00000607635 548 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.68□□□□□ -1.66
NEDD4P46934 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD4P46934 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD4P46934 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD4P46934 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.67□□□□□ -1.66
NEDD4P46934 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
NEDD4P46934 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 AC107021.2-201ENST00000567714 2095 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD4P46934 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD4P46934 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD4P46934 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 SEPT7P3-201ENST00000455017 621 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 FTH1P2-201ENST00000466086 412 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 AC020898.1-201ENST00000474167 787 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NEDD4P46934 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.67□□□□□ -1.66
NEDD4P46934 RPL7P24-201ENST00000493052 752 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.67□□□□□ -1.66
NEDD4P46934 AC008628.1-201ENST00000508663 265 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 AC093770.1-201ENST00000511559 571 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD4P46934 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.67□□□□□ -1.66
NEDD4P46934 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.67□□□□□ -1.66
NEDD4P46934 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD4P46934 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 GNRHR2P1-201ENST00000555315 631 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.67□□□□□ -1.66
NEDD4P46934 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.67□□□□□ -1.66
NEDD4P46934 SNX6P1-201ENST00000601728 1224 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 AC233309.1-201ENST00000619522 751 ntBASIC4.67□□□□□ -1.66
NEDD4P46934 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD4P46934 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.67□□□□□ -1.66
NEDD4P46934 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NEDD4P46934 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
NEDD4P46934 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD4P46934 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
NEDD4P46934 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD4P46934 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD4P46934 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.66□□□□□ -1.66
NEDD4P46934 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.66□□□□□ -1.66
NEDD4P46934 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
NEDD4P46934 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD4P46934 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.66□□□□□ -1.66
NEDD4P46934 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
NEDD4P46934 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD4P46934 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD4P46934 RNU4-44P-201ENST00000363050 141 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 Y_RNA.126-201ENST00000363382 111 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 RN7SKP280-201ENST00000364196 304 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 RNU6-40P-201ENST00000384254 107 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NEDD4P46934 RNU6-628P-201ENST00000410675 107 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD4P46934 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.66□□□□□ -1.66
NEDD4P46934 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.66□□□□□ -1.66
NEDD4P46934 AC004552.1-201ENST00000419089 348 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 ZNF965P-201ENST00000432501 817 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.66□□□□□ -1.66
NEDD4P46934 RPS29P7-201ENST00000439662 171 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD4P46934 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.66□□□□□ -1.66
NEDD4P46934 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD4P46934 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD4P46934 RPS26P3-201ENST00000470205 348 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD4P46934 AC090543.2-201ENST00000483963 348 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 AC004057.1-201ENST00000485827 348 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 OR9N1P-202ENST00000494289 481 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 AGGF1P6-201ENST00000569213 976 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 AC090312.1-201ENST00000580637 348 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.66□□□□□ -1.66
NEDD4P46934 AC053481.4-201ENST00000583164 216 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 AP000255.1-201ENST00000610276 676 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 AC024941.1-201ENST00000612250 334 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 AC080188.3-201ENST00000624842 748 ntBASIC4.66□□□□□ -1.66
NEDD4P46934 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD4P46934 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD4P46934 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.65□□□□□ -1.66
NEDD4P46934 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NEDD4P46934 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
NEDD4P46934 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NEDD4P46934 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
NEDD4P46934 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
NEDD4P46934 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NEDD4P46934 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms