Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL513533.1-201ENST00000453728 415 ntBASIC4.48□□□□□ -1.69
SSR1P43307 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.48□□□□□ -1.69
SSR1P43307 RPL5P13-201ENST00000462840 709 ntBASIC4.48□□□□□ -1.69
SSR1P43307 RPS29P19-201ENST00000479709 171 ntBASIC4.48□□□□□ -1.69
SSR1P43307 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.48□□□□□ -1.69
SSR1P43307 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.48□□□□□ -1.69
SSR1P43307 ATG10-AS1-201ENST00000504846 648 ntBASIC4.48□□□□□ -1.69
SSR1P43307 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.48□□□□□ -1.69
SSR1P43307 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.48□□□□□ -1.69
SSR1P43307 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.48□□□□□ -1.69
SSR1P43307 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.48□□□□□ -1.69
SSR1P43307 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.48□□□□□ -1.69
SSR1P43307 PDCL2P2-201ENST00000533651 189 ntBASIC4.48□□□□□ -1.69
SSR1P43307 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.48□□□□□ -1.69
SSR1P43307 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
SSR1P43307 AC006064.5-201ENST00000541782 248 ntBASIC4.48□□□□□ -1.69
SSR1P43307 AL109766.1-201ENST00000555080 552 ntBASIC4.48□□□□□ -1.69
SSR1P43307 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.48□□□□□ -1.69
SSR1P43307 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.48□□□□□ -1.69
SSR1P43307 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.48□□□□□ -1.69
SSR1P43307 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.48□□□□□ -1.69
SSR1P43307 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SSR1P43307 AP003497.2-201ENST00000624220 967 ntBASIC4.48□□□□□ -1.69
SSR1P43307 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSR1P43307 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SSR1P43307 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.48□□□□□ -1.69
SSR1P43307 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.48□□□□□ -1.69
SSR1P43307 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSR1P43307 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SSR1P43307 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SSR1P43307 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.47□□□□□ -1.69
SSR1P43307 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSR1P43307 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SSR1P43307 IGKV7-3-201ENST00000357453 298 ntBASIC4.47□□□□□ -1.69
SSR1P43307 MIR129-1-201ENST00000384972 72 ntBASIC4.47□□□□□ -1.69
SSR1P43307 CYB5AP4-201ENST00000396692 399 ntBASIC4.47□□□□□ -1.69
SSR1P43307 RPL23AP59-201ENST00000399415 461 ntBASIC4.47□□□□□ -1.69
SSR1P43307 SNORA11F-201ENST00000408237 128 ntBASIC4.47□□□□□ -1.69
SSR1P43307 RNA5SP36-201ENST00000410197 133 ntBASIC4.47□□□□□ -1.69
SSR1P43307 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.47□□□□□ -1.69
SSR1P43307 AL590139.1-201ENST00000416267 400 ntBASIC4.47□□□□□ -1.69
SSR1P43307 AC092647.1-201ENST00000420654 287 ntBASIC4.47□□□□□ -1.69
SSR1P43307 LYPLA1P1-201ENST00000434514 622 ntBASIC4.47□□□□□ -1.69
SSR1P43307 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.47□□□□□ -1.69
SSR1P43307 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.47□□□□□ -1.69
SSR1P43307 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.47□□□□□ -1.69
SSR1P43307 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.47□□□□□ -1.69
SSR1P43307 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.47□□□□□ -1.69
SSR1P43307 MTND3P6-201ENST00000485242 339 ntBASIC4.47□□□□□ -1.69
SSR1P43307 AC078817.1-201ENST00000492623 435 ntBASIC4.47□□□□□ -1.69
SSR1P43307 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.47□□□□□ -1.69
SSR1P43307 CDH12P2-201ENST00000504393 298 ntBASIC4.47□□□□□ -1.69
SSR1P43307 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.47□□□□□ -1.69
SSR1P43307 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.47□□□□□ -1.69
SSR1P43307 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.47□□□□□ -1.69
SSR1P43307 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.47□□□□□ -1.69
SSR1P43307 HMGB1P51-201ENST00000605166 638 ntBASIC4.47□□□□□ -1.69
SSR1P43307 AC090948.1-201ENST00000607464 549 ntBASIC4.47□□□□□ -1.69
SSR1P43307 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.47□□□□□ -1.69
SSR1P43307 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSR1P43307 RN7SL722P-201ENST00000617780 284 ntBASIC4.47□□□□□ -1.69
SSR1P43307 RN7SL565P-201ENST00000618246 284 ntBASIC4.47□□□□□ -1.69
SSR1P43307 MIR7703-201ENST00000620784 77 ntBASIC4.47□□□□□ -1.69
SSR1P43307 AC092159.4-201ENST00000624944 550 ntBASIC4.47□□□□□ -1.69
SSR1P43307 AC140479.6-201ENST00000633535 357 ntBASIC4.47□□□□□ -1.69
SSR1P43307 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSR1P43307 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSR1P43307 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
SSR1P43307 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSR1P43307 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSR1P43307 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.46□□□□□ -1.7
SSR1P43307 AC138915.3-201ENST00000562908 1389 ntBASIC4.46□□□□□ -1.7
SSR1P43307 AL353746.1-201ENST00000566293 6881 ntBASIC4.46□□□□□ -1.7
SSR1P43307 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSR1P43307 OR4K17-201ENST00000315543 1032 ntBASIC4.46□□□□□ -1.7
SSR1P43307 RNA5SP388-201ENST00000362584 119 ntBASIC4.46□□□□□ -1.7
SSR1P43307 RNU6-670P-201ENST00000364312 104 ntBASIC4.46□□□□□ -1.7
SSR1P43307 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SSR1P43307 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSR1P43307 RNU6-152P-201ENST00000384037 107 ntBASIC4.46□□□□□ -1.7
SSR1P43307 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSR1P43307 RNU6-244P-201ENST00000391028 104 ntBASIC4.46□□□□□ -1.7
SSR1P43307 RN7SKP222-201ENST00000410651 315 ntBASIC4.46□□□□□ -1.7
SSR1P43307 RNU6-564P-201ENST00000410983 104 ntBASIC4.46□□□□□ -1.7
SSR1P43307 P2RY10P2-201ENST00000416730 913 ntBASIC4.46□□□□□ -1.7
SSR1P43307 MFSD13B-201ENST00000420133 1290 ntBASIC4.46□□□□□ -1.7
SSR1P43307 AJ239321.1-201ENST00000424255 564 ntBASIC4.46□□□□□ -1.7
SSR1P43307 HMGB1P32-201ENST00000425971 565 ntBASIC4.46□□□□□ -1.7
SSR1P43307 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.46□□□□□ -1.7
SSR1P43307 AL392003.1-201ENST00000434394 243 ntBASIC4.46□□□□□ -1.7
SSR1P43307 GSTA7P-201ENST00000438425 448 ntBASIC4.46□□□□□ -1.7
SSR1P43307 MTCYBP31-201ENST00000438855 1122 ntBASIC4.46□□□□□ -1.7
SSR1P43307 RPL23AP89-201ENST00000439324 255 ntBASIC4.46□□□□□ -1.7
SSR1P43307 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.46□□□□□ -1.7
SSR1P43307 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.46□□□□□ -1.7
SSR1P43307 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.46□□□□□ -1.7
SSR1P43307 EIF2S2P2-201ENST00000447161 982 ntBASIC4.46□□□□□ -1.7
SSR1P43307 RPL7P48-201ENST00000461513 746 ntBASIC4.46□□□□□ -1.7
SSR1P43307 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.46□□□□□ -1.7
SSR1P43307 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms