Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.74□□□□□ -1.65
HADHAP40939 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.74□□□□□ -1.65
HADHAP40939 AC063943.1-201ENST00000465434 453 ntBASIC4.74□□□□□ -1.65
HADHAP40939 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HADHAP40939 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.74□□□□□ -1.65
HADHAP40939 SCARNA22-201ENST00000503991 125 ntBASIC4.74□□□□□ -1.65
HADHAP40939 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.74□□□□□ -1.65
HADHAP40939 AC091868.1-201ENST00000508746 304 ntBASIC4.74□□□□□ -1.65
HADHAP40939 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.74□□□□□ -1.65
HADHAP40939 RPL7L1P13-201ENST00000511702 739 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.74□□□□□ -1.65
HADHAP40939 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.74□□□□□ -1.65
HADHAP40939 AC104417.1-201ENST00000523974 751 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC138701.1-201ENST00000524329 714 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.74□□□□□ -1.65
HADHAP40939 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.74□□□□□ -1.65
HADHAP40939 AL161713.1-201ENST00000555538 145 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.74□□□□□ -1.65
HADHAP40939 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.74□□□□□ -1.65
HADHAP40939 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.74□□□□□ -1.65
HADHAP40939 MTCO1P40-201ENST00000574371 625 ntBASIC4.74□□□□□ -1.65
HADHAP40939 BPTFP1-201ENST00000579209 492 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AL031320.1-201ENST00000604177 357 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC091488.1-201ENST00000604239 660 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AL391358.1-201ENST00000605342 190 ntBASIC4.74□□□□□ -1.65
HADHAP40939 MIR6798-201ENST00000612887 67 ntBASIC4.74□□□□□ -1.65
HADHAP40939 VN1R74P-201ENST00000613259 503 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC006213.4-201ENST00000616184 634 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC090772.4-201ENST00000623599 362 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.74□□□□□ -1.65
HADHAP40939 AL109659.3-201ENST00000624985 950 ntBASIC4.74□□□□□ -1.65
HADHAP40939 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HADHAP40939 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HADHAP40939 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.74□□□□□ -1.65
HADHAP40939 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
HADHAP40939 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HADHAP40939 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HADHAP40939 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 AC090229.1-201ENST00000590983 1609 ntBASIC4.73□□□□□ -1.65
HADHAP40939 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HADHAP40939 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HADHAP40939 TMSB4XP8-201ENST00000402089 135 ntBASIC4.73□□□□□ -1.65
HADHAP40939 RPS4XP9-201ENST00000405151 780 ntBASIC4.73□□□□□ -1.65
HADHAP40939 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.73□□□□□ -1.65
HADHAP40939 AL591848.1-201ENST00000413092 322 ntBASIC4.73□□□□□ -1.65
HADHAP40939 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 TMSB4XP6-201ENST00000415187 135 ntBASIC4.73□□□□□ -1.65
HADHAP40939 TAF13P2-201ENST00000416876 286 ntBASIC4.73□□□□□ -1.65
HADHAP40939 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.73□□□□□ -1.65
HADHAP40939 BX510359.2-201ENST00000417920 305 ntBASIC4.73□□□□□ -1.65
HADHAP40939 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.73□□□□□ -1.65
HADHAP40939 USP9YP21-201ENST00000420603 432 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.73□□□□□ -1.65
HADHAP40939 AC245028.1-201ENST00000423259 256 ntBASIC4.73□□□□□ -1.65
HADHAP40939 TMSB4XP1-201ENST00000424567 135 ntBASIC4.73□□□□□ -1.65
HADHAP40939 RPL37P1-201ENST00000432310 284 ntBASIC4.73□□□□□ -1.65
HADHAP40939 MTCYBP15-201ENST00000433123 1127 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AC008072.1-201ENST00000434254 824 ntBASIC4.73□□□□□ -1.65
HADHAP40939 RPS26P30-201ENST00000443431 335 ntBASIC4.73□□□□□ -1.65
HADHAP40939 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AC073587.1-201ENST00000447093 876 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AC233982.1-201ENST00000451247 436 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AC090142.1-201ENST00000465776 462 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.73□□□□□ -1.65
HADHAP40939 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HADHAP40939 AC126121.1-201ENST00000482313 553 ntBASIC4.73□□□□□ -1.65
HADHAP40939 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HADHAP40939 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 SUMO2P5-201ENST00000506790 245 ntBASIC4.73□□□□□ -1.65
HADHAP40939 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HADHAP40939 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.73□□□□□ -1.65
HADHAP40939 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.73□□□□□ -1.65
HADHAP40939 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.73□□□□□ -1.65
HADHAP40939 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.73□□□□□ -1.65
HADHAP40939 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.73□□□□□ -1.65
HADHAP40939 AP001880.2-201ENST00000538233 448 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.73□□□□□ -1.65
HADHAP40939 GSTP1P1-201ENST00000548078 319 ntBASIC4.73□□□□□ -1.65
HADHAP40939 DYNLL1P4-201ENST00000549314 266 ntBASIC4.73□□□□□ -1.65
HADHAP40939 ZNF971P-201ENST00000562068 1249 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.73□□□□□ -1.65
HADHAP40939 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.73□□□□□ -1.65
HADHAP40939 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HADHAP40939 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 AL359757.1-201ENST00000623176 255 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AP003485.1-201ENST00000625093 753 ntBASIC4.73□□□□□ -1.65
HADHAP40939 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HADHAP40939 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HADHAP40939 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.73□□□□□ -1.65
HADHAP40939 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HADHAP40939 SGO1P1-201ENST00000603525 1447 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC025125.1-201ENST00000624743 1922 ntBASIC4.72□□□□□ -1.65
HADHAP40939 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.72□□□□□ -1.65
HADHAP40939 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms