Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CAPN3P20807 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CAPN3P20807 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CAPN3P20807 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.76□□□□□ -1.65
CAPN3P20807 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CAPN3P20807 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.76□□□□□ -1.65
CAPN3P20807 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CAPN3P20807 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.76□□□□□ -1.65
CAPN3P20807 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CAPN3P20807 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CAPN3P20807 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CAPN3P20807 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CAPN3P20807 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.76□□□□□ -1.65
CAPN3P20807 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CAPN3P20807 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CAPN3P20807 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CAPN3P20807 SNORA70.10-201ENST00000384515 134 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 MIR600-201ENST00000385007 98 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AL080315.1-201ENST00000406055 466 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AL139098.1-201ENST00000407291 389 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AC073264.1-201ENST00000411508 416 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 CYCSP10-201ENST00000417973 294 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CAPN3P20807 EIF4HP2-201ENST00000424380 563 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.76□□□□□ -1.65
CAPN3P20807 RPP40P1-201ENST00000426762 456 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AC104837.2-201ENST00000427236 424 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 MTCYBP32-201ENST00000427945 1084 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AL360081.1-201ENST00000428299 555 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.76□□□□□ -1.65
CAPN3P20807 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.76□□□□□ -1.65
CAPN3P20807 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.76□□□□□ -1.65
CAPN3P20807 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.76□□□□□ -1.65
CAPN3P20807 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.76□□□□□ -1.65
CAPN3P20807 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.76□□□□□ -1.65
CAPN3P20807 IGHV5-78-201ENST00000450948 295 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AL645939.1-201ENST00000453429 797 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 RPS3AP53-201ENST00000454716 778 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 NF1P3-201ENST00000457709 450 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 SNORD108-201ENST00000459332 71 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 GAPDHP36-201ENST00000480688 918 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.76□□□□□ -1.65
CAPN3P20807 AC073358.1-201ENST00000505671 684 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 PTGES3P3-201ENST00000511479 482 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AC104057.1-201ENST00000515547 497 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 RNU2-30P-201ENST00000516209 141 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 RN7SKP147-201ENST00000517154 244 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.76□□□□□ -1.65
CAPN3P20807 DEFB130C-202ENST00000530001 230 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 TOMM20P2-201ENST00000540082 421 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CAPN3P20807 OR6C73P-201ENST00000546432 358 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AC093519.1-201ENST00000566109 298 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.76□□□□□ -1.65
CAPN3P20807 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.76□□□□□ -1.65
CAPN3P20807 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.76□□□□□ -1.65
CAPN3P20807 AC234771.5-201ENST00000600161 514 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.76□□□□□ -1.65
CAPN3P20807 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.76□□□□□ -1.65
CAPN3P20807 AC083899.3-201ENST00000603413 594 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 RNF138P2-201ENST00000603490 592 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AC104687.2-201ENST00000604442 342 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AP005137.2-201ENST00000609238 400 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AL391834.2-201ENST00000609982 546 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 EIF3FP1-201ENST00000613970 806 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 AC009269.6-201ENST00000621778 588 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.76□□□□□ -1.65
CAPN3P20807 CASC19-206ENST00000641028 1430 ntBASIC4.76□□□□□ -1.65
CAPN3P20807 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CAPN3P20807 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CAPN3P20807 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CAPN3P20807 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CAPN3P20807 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CAPN3P20807 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CAPN3P20807 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.76□□□□□ -1.65
CAPN3P20807 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CAPN3P20807 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CAPN3P20807 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CAPN3P20807 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CAPN3P20807 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CAPN3P20807 SCARNA15-201ENST00000607520 4325 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 AL445487.1-201ENST00000415694 1580 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 MTCO1P24-201ENST00000515438 1558 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CAPN3P20807 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CAPN3P20807 RNU6-839P-201ENST00000363347 108 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 MTCO1P56-201ENST00000401674 224 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 AL592291.1-201ENST00000403830 352 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 AP000580.1-201ENST00000404439 358 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.75□□□□□ -1.65
CAPN3P20807 AC027644.1-201ENST00000419595 298 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 GTF2IP2-201ENST00000424290 697 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.75□□□□□ -1.65
CAPN3P20807 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CAPN3P20807 IFNNP1-201ENST00000429219 553 ntBASIC4.75□□□□□ -1.65
CAPN3P20807 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CAPN3P20807 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.75□□□□□ -1.65
CAPN3P20807 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.75□□□□□ -1.65
CAPN3P20807 AC092393.1-201ENST00000439625 742 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms