Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.25□□□□□ -1.89
CD28P10747 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 MIR4429-201ENST00000580105 73 ntBASIC3.25□□□□□ -1.89
CD28P10747 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 MIMT1-201ENST00000597105 1050 ntBASIC3.25□□□□□ -1.89
CD28P10747 BNIP3P33-201ENST00000598912 569 ntBASIC3.25□□□□□ -1.89
CD28P10747 AL138721.1-201ENST00000616756 179 ntBASIC3.25□□□□□ -1.89
CD28P10747 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD28P10747 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD28P10747 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CD28P10747 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CD28P10747 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CD28P10747 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CD28P10747 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CD28P10747 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD28P10747 RNU6-984P-201ENST00000363236 109 ntBASIC3.24□□□□□ -1.89
CD28P10747 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD28P10747 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.24□□□□□ -1.89
CD28P10747 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.24□□□□□ -1.89
CD28P10747 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.24□□□□□ -1.89
CD28P10747 CYCSP19-201ENST00000411715 316 ntBASIC3.24□□□□□ -1.89
CD28P10747 AL161631.1-201ENST00000417933 486 ntBASIC3.24□□□□□ -1.89
CD28P10747 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.24□□□□□ -1.89
CD28P10747 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.24□□□□□ -1.89
CD28P10747 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.24□□□□□ -1.89
CD28P10747 FGF7P3-201ENST00000454645 303 ntBASIC3.24□□□□□ -1.89
CD28P10747 AC005229.2-201ENST00000456995 399 ntBASIC3.24□□□□□ -1.89
CD28P10747 RNA5SP246-201ENST00000458909 119 ntBASIC3.24□□□□□ -1.89
CD28P10747 RNU6-775P-201ENST00000459318 96 ntBASIC3.24□□□□□ -1.89
CD28P10747 AC079804.1-201ENST00000461922 436 ntBASIC3.24□□□□□ -1.89
CD28P10747 RPL5P30-201ENST00000465511 891 ntBASIC3.24□□□□□ -1.89
CD28P10747 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.24□□□□□ -1.89
CD28P10747 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.24□□□□□ -1.89
CD28P10747 AC005912.1-201ENST00000495392 255 ntBASIC3.24□□□□□ -1.89
CD28P10747 AC146944.2-203ENST00000502493 354 ntBASIC3.24□□□□□ -1.89
CD28P10747 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.24□□□□□ -1.89
CD28P10747 FABP5P6-201ENST00000510588 409 ntBASIC3.24□□□□□ -1.89
CD28P10747 NPM1P41-201ENST00000512920 831 ntBASIC3.24□□□□□ -1.89
CD28P10747 AC139495.1-202ENST00000513164 354 ntBASIC3.24□□□□□ -1.89
CD28P10747 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.24□□□□□ -1.89
CD28P10747 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.24□□□□□ -1.89
CD28P10747 AC090151.1-201ENST00000520784 730 ntBASIC3.24□□□□□ -1.89
CD28P10747 OR4V1P-201ENST00000525394 1140 ntBASIC3.24□□□□□ -1.89
CD28P10747 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.24□□□□□ -1.89
CD28P10747 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.24□□□□□ -1.89
CD28P10747 RN7SL703P-201ENST00000578485 302 ntBASIC3.24□□□□□ -1.89
CD28P10747 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
CD28P10747 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.24□□□□□ -1.89
CD28P10747 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.24□□□□□ -1.89
CD28P10747 AL606490.9-201ENST00000603331 271 ntBASIC3.24□□□□□ -1.89
CD28P10747 AC245389.1-201ENST00000605141 529 ntBASIC3.24□□□□□ -1.89
CD28P10747 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CD28P10747 AC116447.1-201ENST00000613153 453 ntBASIC3.24□□□□□ -1.89
CD28P10747 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CD28P10747 CDRT1-208ENST00000630868 794 ntBASIC3.24□□□□□ -1.89
CD28P10747 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.24□□□□□ -1.89
CD28P10747 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD28P10747 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD28P10747 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD28P10747 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD28P10747 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.24□□□□□ -1.89
CD28P10747 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CD28P10747 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
CD28P10747 AC009229.4-201ENST00000623854 1947 ntBASIC3.23□□□□□ -1.89
CD28P10747 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CD28P10747 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD28P10747 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CD28P10747 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD28P10747 AC067945.1-201ENST00000342609 618 ntBASIC3.23□□□□□ -1.89
CD28P10747 MIR448-201ENST00000362131 111 ntBASIC3.23□□□□□ -1.89
CD28P10747 RNU6-304P-201ENST00000364855 107 ntBASIC3.23□□□□□ -1.89
CD28P10747 RNA5SP22-201ENST00000365393 109 ntBASIC3.23□□□□□ -1.89
CD28P10747 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CD28P10747 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.23□□□□□ -1.89
CD28P10747 ATP5F1P3-201ENST00000397213 657 ntBASIC3.23□□□□□ -1.89
CD28P10747 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.23□□□□□ -1.89
CD28P10747 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.23□□□□□ -1.89
CD28P10747 RN7SKP167-201ENST00000411047 285 ntBASIC3.23□□□□□ -1.89
CD28P10747 CYP1D1P-201ENST00000416662 1433 ntBASIC3.23□□□□□ -1.89
CD28P10747 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CD28P10747 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.23□□□□□ -1.89
CD28P10747 USP9YP4-201ENST00000424401 1745 ntBASIC3.23□□□□□ -1.89
CD28P10747 AC073335.1-201ENST00000427776 363 ntBASIC3.23□□□□□ -1.89
CD28P10747 AC092013.1-201ENST00000438795 332 ntBASIC3.23□□□□□ -1.89
CD28P10747 AC245517.2-201ENST00000442890 346 ntBASIC3.23□□□□□ -1.89
CD28P10747 AL354710.1-201ENST00000453641 246 ntBASIC3.23□□□□□ -1.89
CD28P10747 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.23□□□□□ -1.89
CD28P10747 AC091959.2-201ENST00000477363 321 ntBASIC3.23□□□□□ -1.89
CD28P10747 AC104164.2-201ENST00000496953 495 ntBASIC3.23□□□□□ -1.89
CD28P10747 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CD28P10747 AC021087.2-201ENST00000504656 1203 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms